Camelia, the Perl 6 bug

IRC log for #bioclipse, 2007-08-08

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All times shown according to UTC.

Time Nick Message
05:20 masak joined #bioclipse
07:20 laszlof joined #bioclipse
07:32 olas joined #bioclipse
07:32 olas mo'in
07:32 masak morning
07:33 laszlof mo'in
07:42 jonalv joined #bioclipse
07:46 * jonalv summons egonw
07:49 edrin joined #bioclipse
07:49 masak jonalv: almost :)
07:49 edrin morning
07:49 masak edrin: morning
07:50 edrin olas: was there something changed, so Exceptions/problems are not forwarded to the console anymore? (in either Eclipse or Bioclipse itself)
07:51 jonalv Are you using -consolelog?
07:51 edrin while developing i got problems with cxf-webservice lib, a function was silently dieing...
07:52 edrin jonalv: is this required now?
07:52 jonalv I thought so...
07:52 edrin where do i have to give this?
07:52 edrin even when i run from withing eclipse?
07:52 jonalv yes in the run dialog
07:54 edrin and even when i run in debug mode?
07:54 jonalv Well I would think so. Normally it runs the same arguments in debug mode
07:54 jonalv So set it once...
07:55 olas edrin: you have always needed to set -consoleLog as argument
07:56 olas edrin: check out and try the biomoby plugin
07:56 olas you'll like it
07:56 olas (need to commit some more first)
07:56 CIA-32 bioclipse: ospjuth * r3651 /trunk/playground/plugins/net.bioclipse.biomoby/s​rc/net/bioclipse/biomoby/BioclipseMobyModel.java: Added refresh actions to cache impl
07:58 CIA-32 bioclipse: ospjuth * r3652 /trunk/playground/plugins/net.biocl​ipse.biomoby/src/net/bioclipse/biom​oby/model/MobyViewServiceType.java: Fixed lazy loading problem in service type
07:59 CIA-32 bioclipse: ospjuth * r3653 /trunk/playground/plugins/net.biocl​ipse.biomoby/src/net/bioclipse/biom​oby/model/BioclipseMobyThread.java: Added thread for refreshing list in background
07:59 CIA-32 bioclipse: ospjuth * r3654 /trunk/playground/plugins/net.bioclipse.​biomoby/src/net/bioclipse/biomoby/views/ (MobyView.java MobyViewContentProvider.java): Use new BG loading of resources
08:11 edrin consoleLog as program argument?
08:12 jonalv -consolelog as program argument
08:12 edrin ok
08:13 edrin strange, I don't remember to have this done previously
08:13 olas edrin: you are getting old :-)
08:14 olas jonalv: do you have the code for getting a file from the local plugin (not src)?
08:15 olas or do I need to find out for myself?
08:15 jonalv Hm it probably takes the same amount of time for you to find it as for me..
08:15 olas laszlof: did you solve that icon loading problem?
08:16 olas so that a plugin can load an icon in its own plugin install dir?
08:16 olas else I will do it now...
08:18 olas laszlof: since nothing committed, I will do it now
08:39 laszlof sorry, was away working on the laptop.
08:49 EskilA joined #bioclipse
08:49 EskilA hello
08:50 egonw joined #bioclipse
08:50 jonalv hi EskilA
08:59 jonalv hi egonw
09:13 egonw moin
09:16 jonalv egonw,  I have done some studying and the Nebula Grid widget is supposed to support SWT.VIRTUAL which means some form of lazy initialisation so I am on it now
09:16 jonalv Trying to get that working
09:32 CIA-32 bioclipse: ospjuth * r3655 /trunk/playground/plugins/net.biocli​pse.biomoby/src/net/bioclipse/biomob​y/views/MobyViewLabelProvider.java: Use icons for moby services
09:32 CIA-32 bioclipse: ospjuth * r3656 /trunk/playground/plugins/net.biocl​ipse.biomoby/src/net/bioclipse/biom​oby/model/MobyViewServiceType.java: Allow for refresh of children
09:33 olas jonalv and EskilA: see you at 13.15
09:33 olas let's meet in EskilA's room
09:33 jonalv oki
09:33 EskilA ok
09:34 CIA-32 bioclipse: ospjuth * r3657 /trunk/playground/plugins/net.bioclip​se.biomoby/src/net/bioclipse/biomoby/ (3 files in 2 dirs): Added refresh event
09:34 CIA-32 bioclipse: ospjuth * r3658 /trunk/playground/plugins/net.bioclipse.biomoby​/src/net/bioclipse/biomoby/views/MobyView.java: Added refresh and update cache actions
09:35 CIA-32 bioclipse: ospjuth * r3659 /trunk/playground/plugins/net.biocl​ipse.biomoby/src/net/bioclipse/biom​oby/model/MobyViewContainer.java: Fixed NPE in createChildren
09:35 CIA-32 bioclipse: ospjuth * r3660 /trunk/playground/plugins/net.bioclipse.​biomoby/src/net/bioclipse/biomoby/model/ (MobyViewEmpty.java MobyViewError.java MobyViewLoading.java): Added new state objects for lazy loading
09:53 CIA-32 bioclipse: ospjuth * r3661 /trunk/playground/plugins/net.bioclip​se.biomoby/src/net/bioclipse/biomoby/​views/MobyViewContentProvider.java: Catch refresh exception. No idea how to resolve this so just ignoring it.
09:54 CIA-32 bioclipse: ospjuth * r3662 /trunk/playground/plugins/net.bioclipse.biomoby/s​rc/net/bioclipse/biomoby/BioclipseMobyModel.java: Fixed notifications when updating cache
09:55 CIA-32 bioclipse: ospjuth * r3663 /trunk/playground/plugins/net.bioclip​se.biomoby/src/net/bioclipse/biomoby/​views/MobyViewContentProvider.java: Commented exception due to refresh called on uninitialized viewer
09:55 * olas is off for lunch
10:03 Nielsout that's a good idea olas  :)
11:08 CIA-32 bioclipse: ospjuth * r3664 /trunk/playground/plugins/net.bioclipse.biomoby/ (2 files in 2 dirs): Removed unused dialog and added whale icon
11:08 CIA-32 bioclipse: ospjuth * r3665 /trunk/plugins/net.bioclipse/src/n​et/bioclipse/util/ImageUtils.java: Allow for lookup of icons by pluginID and relative path
11:12 egonw joined #bioclipse
11:18 EskilA joined #bioclipse
11:43 CIA-32 bioclipse: biocoder * r3666 /trunk/plugins/net.bioclipse.statistics/src/net/b​ioclipse/model/MatrixResourcePropertySource.java: Updated name for propertydescriptor
12:17 CIA-32 bioclipse: biocoder * r3667 /trunk/plugins/net.bioclipse.statistics/sr​c/net/bioclipse/model/MatrixResource.java: Wrote new matrix parser that can handle tab, space, and comma separated files with column and row headers
12:18 CIA-32 bioclipse: biocoder * r3668 /trunk/plugins/net.bioclip​se.statistics/plugin.xml: added csv as an extension for matrix files
12:57 EskilA joined #bioclipse
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14:42 CIA-32 bioclipse: jonalv * r3669 /trunk/plugins/net.bioclipse.statistics/ (6 files in 4 dirs):
14:42 CIA-32 bioclipse: Added the Nebula Grid Widget and wrote a new MatrixEditor called GridEditor that uses it instead of KTable. Both editors remain for now. I have not succeded in getting the old editor to be the default editor.
14:42 CIA-32 bioclipse: The grid editor currently slurps all rows into memory at the same time but this should not be the behavior later on.
14:44 egonw joined #bioclipse
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18:16 edrin left #bioclipse
18:29 egonw joined #bioclipse
19:32 edrin joined #bioclipse
19:34 edrin hi egonw
19:34 egonw hi edrin
22:44 laszlof joined #bioclipse

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