Camelia, the Perl 6 bug

IRC log for #bioclipse, 2007-11-13

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All times shown according to UTC.

Time Nick Message
07:56 EskilA left #bioclipse
08:09 egonw joined #bioclipse
08:35 jonalv joined #bioclipse
08:40 olas joined #bioclipse
09:18 olas egonw: will you be around today?
09:18 olas We will set up the structure for Bioclipse2 today
09:18 olas and would value your inputs
09:18 olas and wisdom
09:19 olas if you have time to check in from time to time that would be great
09:21 egonw yes, might have some time for that...
10:27 egonw bbl
10:34 CIA-18 bioclipse: jonalv * r4190 /branches/bioclipse2/ (playground/ testing/): rename testing -> playground
10:35 jonalv joined #bioclipse
10:37 masak joined #bioclipse
10:44 CIA-18 bioclipse: jonalv * r4192 /branches/bioclipse2/chemoinformatics/:
10:45 CIA-18 bioclipse: jonalv * r4193 /branches/bioclipse2/bioinformatics/:
10:46 CIA-18 bioclipse: jonalv * r4194 /branches/bioclipse2/core/:
10:47 CIA-18 bioclipse: jonalv * r4196 /branches/bioclipse2/ (Tools/ tools/):
10:47 masak wee! commits!
12:28 egonw joined #bioclipse
12:46 masak joined #bioclipse
12:47 masak egonw: FYI. mini-hackathon in Uppsala today for getting BC2 launched
12:47 jonalv joined #bioclipse
13:02 masak joined #bioclipse
13:20 jonalv joined #bioclipse
13:25 CIA-18 bioclipse: ospjuth * r4197 /branches/bioclipse2/core/features/: Added Features dir
13:26 olas_ joined #bioclipse
13:26 CIA-18 bioclipse: ospjuth * r4198 /branches/bioclipse2/core/plugins/: Added plugins dir
13:30 CIA-18 bioclipse: ospjuth * r4199 /branches/bioclipse2/core/plu​gins/net.bioclipse.core.ui/: Initial import.
13:31 CIA-18 bioclipse: ospjuth * r4200 /branches/bioclipse2/core/pl​ugins/net.bioclipse.core.ui/ (37 files in 10 dirs): Initial import.
13:34 CIA-18 bioclipse: carl_masak * r4201 /branches/bioclipse2/core/plugin​s/net.bioclipse.core.scripting/:
13:34 CIA-18 bioclipse: [net.bioclipse.core.scripting]
13:34 CIA-18 bioclipse: * initial import
13:35 CIA-18 bioclipse: carl_masak * r4203 /branches/bioclipse2/core/plugins/n​et.bioclipse.core.scripting.tests/: Initial import.
14:18 masak joined #bioclipse
14:20 masak` joined #bioclipse
14:25 CIA-18 bioclipse: ospjuth * r4206 /branches/bioclipse2/core/plu​gins/net.bioclipse.logging/: Initial import of new logging plugin.
14:25 CIA-18 bioclipse: ospjuth * r4207 /branches/bioclipse2/core/pl​ugins/net.bioclipse.logging/ (13 files in 7 dirs): Initial import of new logging plugin.
14:32 steinbeck joined #bioclipse
14:32 steinbeck greetings everybody from the 3rd GCC in Goslar
14:33 pohyg joined #bioclipse
14:39 egonw olas_: anything I can check yet?
14:39 olas_ not really
14:39 olas_ will probably not be anything today
14:39 egonw ack
14:39 olas_ this takes more time than we expected..
14:40 egonw sure
14:40 egonw it always does
14:40 egonw I have not been able to do anything today...
14:40 egonw daddy day...
14:40 egonw but even then...
14:47 CIA-18 bioclipse: carl_masak * r4208 /branches/bioclipse2/core/plugins/​net.bioclipse.core.scripting.tests​/src/net/bioclipse/core/scripting/ (ScriptingTestCase.java tests/):
14:47 CIA-18 bioclipse: [net.bioclipse.core.scripting.tests]
14:47 CIA-18 bioclipse: * renamed to net.bioclipse.core.scripting
14:47 CIA-18 bioclipse: * this is because of the benefits re increased
14:47 CIA-18 bioclipse:  access to protected methods and fields
14:47 CIA-18 bioclipse:  in class being tested
14:59 CIA-18 bioclipse: carl_masak * r4209 /trunk/plugins/net.bioclipse.rhino/​src/net/bioclipse/plugins/bc_rhino/ (JarClasspathLoader.java ScriptingTools.java):
14:59 CIA-18 bioclipse: [JarClasspathLoader.java]
14:59 CIA-18 bioclipse: * extracted into convenience method
14:59 CIA-18 bioclipse: [ScriptingTools.java]
14:59 CIA-18 bioclipse: * corrected typos
15:02 CIA-18 bioclipse: ospjuth * r4210 /branches/bioclipse2/core/plugin​s/net.bioclipse.core.ui.tests/: Initial import of test plugin for core UI.
15:02 CIA-18 bioclipse: ospjuth * r4211 /branches/bioclipse2/core/plugi​ns/net.bioclipse.core.ui.tests/ (14 files in 9 dirs): Initial import of test plugin for core UI.
15:03 CIA-18 bioclipse: ospjuth * r4212 /branches/bioclipse2/core/pl​ugins/net.bioclipse.core.ui/ (META-INF/MANIFEST.MF src/net/bioclipse/core/ui/views/): Added package to match JUnit4
15:22 CIA-18 bioclipse: carl_masak * r4213 /branches/bioclipse2/core/plugin​s/net.bioclipse.core.scripting/ (6 files in 4 dirs):
15:22 CIA-18 bioclipse: [net.bioclipse.core.scripting]
15:22 CIA-18 bioclipse: * added js scripting
15:35 CIA-18 bioclipse: jonalv * r4214 /branches/bioclipse2/core/plugin​s/net.bioclipse.core.business/: Initial import.
15:35 CIA-18 bioclipse: jonalv * r4215 /branches/bioclipse2/core/plugi​ns/net.bioclipse.core.business/ (12 files in 7 dirs): Initial import.
15:38 CIA-18 bioclipse: jonalv * r4216 /branches/bioclipse2/core/plugins/n​et.bioclipse.core.business.tests/: Initial import.
15:40 CIA-18 bioclipse: jonalv * r4217 /branches/bioclipse2/core/plugins/​net.bioclipse.core.business.tests/ (11 files in 8 dirs): Initial import.
15:40 egonw ah... Bioclipse has 'core bussiness' now ? :)
15:41 masak :)
15:41 egonw getting BC out does qualify as core business I guess :)
15:41 egonw .. BC2 out ...
15:41 masak we are suffering from severe hierarchitis right now
15:41 egonw :)
15:41 egonw yeah, me feels lucky to be so far away :)
15:42 masak please do
15:42 egonw btw, out of toffee's I guess?
15:42 masak wrong location :(
15:42 egonw each commit counts double now
15:42 egonw ah, what a shame
15:42 masak indeed
15:42 egonw well, better for your health
15:43 masak but worse for moreale...
15:43 masak I could use the sugar kick
15:45 egonw ummm... did you just see that email from Deane?
15:45 egonw from Harvard ?
15:45 egonw wants to joint BC development...
15:47 masak` joined #bioclipse
15:49 jonalv_ joined #bioclipse
15:53 egonw ok, going offline now
15:53 egonw bye
16:13 CIA-18 bioclipse: jonalv * r4218 /branches/bioclipse2/core/plugins/spring/: Initial import.
16:16 CIA-18 bioclipse: jonalv * r4219 /branches/bioclipse2/core/plugins/spring/ (16 files in 8 dirs): Initial import.
16:33 * jonalv_ is creating a lot of more or less ampty plugins and fells a bit silly
16:34 CIA-18 bioclipse: jonalv * r4221 /branches/bioclipse2/core/plug​ins/net.bioclipse.core.domain/ (11 files in 7 dirs): Initial import.
16:35 CIA-18 bioclipse: jonalv * r4222 /branches/bioclipse2/bioinformatics/features/:
16:36 CIA-18 bioclipse: jonalv * r4223 /branches/bioclipse2/bioinformatics/plugin/:
16:36 CIA-18 bioclipse: jonalv * r4224 /branches/bioclipse2/bioinformatics/ (plugin/ plugins/):
16:47 CIA-18 bioclipse: jonalv * r4225 /branches/bioclipse2/bioinformatic​s/plugins/net.bioclipse.biojava/: Initial import.
16:47 CIA-18 bioclipse: jonalv * r4226 /branches/bioclipse2/bioinformati​cs/plugins/net.bioclipse.biojava/ (7 files in 4 dirs): Initial import.
17:00 CIA-18 bioclipse: jonalv * r4227 /branches/bioclipse2/bioinformatics/plugins/ne​t.bioclipse.bioinformatics.biojava.business/: Initial import.
17:00 CIA-18 bioclipse: jonalv * r4228 /branches/bioclipse2/bioinformatics/plugins/n​et.bioclipse.bioinformatics.biojava.business/ (13 files in 8 dirs): Initial import.
17:01 CIA-18 bioclipse: jonalv * r4229 /branches/bioclipse2/core/plug​ins/net.bioclipse.core.domain/ (3 files in 2 dirs): changed name ISequence -> Sequence
17:04 CIA-18 bioclipse: jonalv * r4230 /branches/bioclipse2/bioinformatics/plugins/net.b​ioclipse.bioinformatics.biojava.business.tests/: Initial import.
17:05 CIA-18 bioclipse: jonalv * r4231 /branches/bioclipse2/bioinformatics/plugins/net.​bioclipse.bioinformatics.biojava.business.tests/ (11 files in 8 dirs): Initial import.
17:12 CIA-18 bioclipse: jonalv * r4232 /branches/bioclipse2/bioinformatics/plugins/ (net.bioclipse.bioinformatics.biojava/ net.bioclipse.biojava/): rename
19:24 shk3 joined #bioclipse
21:23 huwawa joined #bioclipse
22:15 edrin joined #bioclipse
22:15 edrin hi
22:16 edrin hi shk3

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