Camelia, the Perl 6 bug

IRC log for #bioclipse, 2008-06-26

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All times shown according to UTC.

Time Nick Message
06:40 rojasm joined #bioclipse
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08:47 CIA-34 bioclipse: ospjuth * r5943 /bioclipse2/trunk/plugins/net.bioclips​e.core/src/net/bioclipse/core/domain/ (5 files): Updated interfaces for selection chemical entities in Bioclipse.
08:48 CIA-34 bioclipse: ospjuth * r5944 /bioclipse2/trunk/plugins/net.bioclipse.c​dk10.jchempaint/src/net/bioclipse/cdk10/j​chempaint/views/Java2DRendererView.java: Use new ChemicalSelection.
08:51 CIA-34 bioclipse: ospjuth * r5945 /bioclipse2/trunk/plugins/net.bioclipse.core/src​/net/bioclipse/core/domain/ScriptSelection.java: Added selection to be able to contribute scripts directly to components with scripting language, e.g. Jmol.
08:55 CIA-34 bioclipse: ospjuth * r5946 /bioclipse2/trunk/plugins/net.bioclipse.core/src​/net/bioclipse/core/domain/ScriptSelection.java: Added namespace to ScriptSelection.
09:06 CIA-34 bioclipse: ospjuth * r5947 /bioclipse2/trunk/plugins/net.bioclipse.core/src​/net/bioclipse/core/domain/ScriptSelection.java: ScriptSelection now accepts multiple entries.
09:08 CIA-34 bioclipse: ospjuth * r5948 /bioclipse2/trunk/plugins/net.bioclipse.core/src​/net/bioclipse/core/domain/ScriptSelection.java: Added constructores and documented code.
09:09 shk3 joined #bioclipse
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09:53 CIA-34 bioclipse: goglepox * r5949 /bioclipse2/trunk/plugins/ne​t.bioclipse.core/plugin.xml: Fixed Expand and Collapse Zip-file and enabled the actions for Jar-files
09:54 jonalv Does someone know how I can change the order of the pages in a multi page editor? I must create them in one order because one of them needs dta that's easiset calculated when setting up the model for another one. But I wan't to present them in another order...
09:56 olas hmm
09:56 olas tricky one
09:56 olas can you not refactor out the things calculated?
09:56 jonalv yea...
09:57 olas seems like you have designed the MPE wrong
09:57 jonalv olas: I guess I could but it's not exactly easy...
09:57 olas but I guess it's possible
09:57 olas ask on Eclipse newsgroup
09:57 olas or google for it
09:57 jonalv yea it's probably because I use the KTable widget. It has a bit of a strange model which I have problems figuring out how to work best with...
09:59 olas switch to nebula?
09:59 * olas is afk for lunch
09:59 jonalv yea well that's even more work
10:00 edrin hi
10:00 jonalv hi edrin
10:07 * olas is back from a healthy lunch
10:07 olas 8 mins
10:07 olas quick lunch
10:13 jonalv TRying to do the refactoring. It seems impossible to create the model before the table... :(
10:14 jonalv hm or maybe...
10:26 jonalv yes! it worked :)
10:44 CIA-34 bioclipse: ospjuth * r5950 /bioclipse2/trunk/plugins/net.bioclipse.core/src​/net/bioclipse/core/domain/ScriptSelection.java: Return Map<> not Object.
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11:46 CIA-34 bioclipse: ospjuth * r5951 /bioclipse2/trunk/plugins/net.bioclip​se.jmol/src/net/bioclipse/jmol/views/ (JmolPanel.java JmolView.java): Complete rewrite of readtOnSelection() in JmolView. Now it's possible to select molecules, conformers, atoms/bonds by different adapters.
11:47 CIA-34 bioclipse: ospjuth * r5952 /bioclipse2/trunk/plugins/net.biocl​ipse.pcore/src/net/bioclipse/pcore/ (6 files in 3 dirs): Post chemical selections to Eclipse selection service, for e.g. Jmol.
11:51 CIA-34 bioclipse: ospjuth * r5953 /bioclipse2/trunk/plugins/net.bioclips​e.pcore/src/net/bioclipse/pcore/model/ (PcoreConformer.java PcoreMolecule.java): Added conformer functionality, and show all conformers if molecule is selected.
12:52 EskilA_ joined #bioclipse
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13:29 CIA-34 bioclipse: ospjuth * r5954 /bioclipse2/trunk/plugins/net.biocl​ipse.pcore/src/net/bioclipse/pcore/ (3 files in 2 dirs): Provide model selections via ModelSelection and not ScriptSelection.
13:30 CIA-34 bioclipse: ospjuth * r5955 /bioclipse2/trunk/plugins/net.bioclipse.jmol​/src/net/bioclipse/jmol/views/JmolView.java: Add possibility to visualize multiple conformers in jmol at the same time.
13:42 CIA-34 bioclipse: ospjuth * r5956 /bioclipse2/trunk/plugins/net.bioclip​se.jmol/src/net/bioclipse/jmol/views/ (JmolView.java StatusListener.java): Removed some debug out and changed logger.info to debug for StatusListener.
14:01 edrin left #bioclipse
15:12 CIA-34 bioclipse: ospjuth * r5957 /bioclipse2/trunk/plugins/net.biocl​ipse.pcore/src/net/bioclipse/pcore/ (9 files in 3 dirs): Hitsets created on execution and show up in HitsPage.
15:12 CIA-34 bioclipse: ospjuth * r5958 /bioclipse2/trunk/plugins/net.bioclipse.core/src​/net/bioclipse/core/domain/ModelSelection.java: Added and documented constructors.
15:12 olas left #bioclipse
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15:23 CIA-34 bioclipse: ospjuth * r5959 /bioclipse2/trunk/plugins/net.bioclipse.jmol​/src/net/bioclipse/jmol/views/JmolView.java: Test using for loop instead of iterator. Same bug.
15:31 EskilA_ left #bioclipse
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22:17 CIA-34 bioclipse: edrin_t * r5960 /xws/trunk/xws-component/src/net/bioclipse/xws/ (34 files in 7 dirs): ...
22:17 edrin joined #bioclipse
22:18 CIA-34 bioclipse: edrin_t * r5961 /xws/trunk/xws-component/src/net/bioclipse/​xws/component/adhoc/CommandProcessor.java:
22:19 CIA-34 bioclipse: edrin_t * r5962 /xws/trunk/xws-component/src/net/bi​oclipse/xws/xmpp/XMLConverter.java:
22:20 CIA-34 bioclipse: edrin_t * r5963 /xws/trunk/xws-component/src/net/bio​clipse/xws/xmpp/IoDataElement.java:
22:21 CIA-34 bioclipse: edrin_t * r5964 /xws/trunk/xws-component/src/n​et/bioclipse/xws/xmpp/iodata/ (. IoDataElement.java):

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