| Time |
S |
Nick |
Message |
| 01:34 |
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| 02:01 |
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| 03:51 |
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| 06:30 |
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| 07:00 |
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| 07:04 |
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| 08:01 |
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| 08:19 |
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| 08:58 |
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| 09:02 |
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| 09:05 |
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| 09:19 |
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shk3 |
hi all |
| 09:19 |
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zarah |
hi shk3 |
| 09:32 |
|
shk3 |
does anybody know about the concept of the virtual project in bc2? |
| 09:32 |
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shk3 |
can I expect a project called virtual to exist? |
| 09:49 |
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Gpox |
thats the idea, you should use net.bc.core.Activator.getVirtualProject() to get it |
| 09:52 |
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| 10:15 |
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| 10:15 |
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shk3 |
Gpox: thanks |
| 11:32 |
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| 12:02 |
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jonalv joined #bioclipse |
| 12:10 |
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olas joined #bioclipse |
| 12:11 |
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olas |
hi |
| 12:11 |
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zarah |
hi olas |
| 12:11 |
|
olas |
hi jonalv |
| 12:11 |
|
* olas |
and jonalv is at Euro QSAR 2008 |
| 12:15 |
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jonalv |
hi olas |
| 12:36 |
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jonalv |
shk3: I see you imported the services plugin from bc1. I guess we will have to adapt it to the new world order... |
| 12:37 |
|
jonalv |
*weservices plugin |
| 12:38 |
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jonalv |
If you are only using the axis code perhaps we should make an axis pluign instead? |
| 12:43 |
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jonalv |
bbl |
| 13:20 |
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| 13:42 |
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| 13:42 |
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jonalv |
hi |
| 13:42 |
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zarah |
hi jonalv |
| 13:44 |
|
gilleain |
Does anyone know if there is an equivalent in bc2 to the compute plugin? |
| 13:44 |
|
gilleain |
And if not, is it reasonable to port it over? |
| 13:44 |
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gilleain |
(I have looked, but I thought it might have changed name) |
| 14:27 |
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| 14:32 |
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jonalv |
gilleain: What does it do? :) |
| 14:33 |
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gilleain |
It depends the seneca plugin. |
| 14:33 |
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jonalv |
This sounds familiar... |
| 14:33 |
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jonalv |
go on |
| 14:34 |
|
gilleain |
No, no it's not a wrapper. |
| 14:37 |
|
gilleain |
Sigh. Why does the word "mish-mash" echo in my mind... |
| 14:37 |
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jonalv |
I don't know... |
| 14:46 |
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| 14:46 |
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* gilleain |
goes for a cup of tea |
| 15:02 |
|
shk3 |
loader constraint violation: loader (instance of org/eclipse/osgi/internal/baseadaptor/DefaultClassLoader) previously initiated loading for a different type with name "org/xmlcml/cml/element/CMLMolecule" |
| 15:02 |
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shk3 |
could that be the problem with cml libraries we had before? |
| 15:03 |
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shk3 |
but my plugin does not depend on cdk10 |
| 15:08 |
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jonalv |
I have not seen exactly that one before |
| 15:10 |
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shk3 |
hm, sounds like different versions of cmlmolecule exist |
| 15:10 |
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shk3 |
would be my interpretation |
| 15:10 |
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jonalv |
But I have switched jar file for jumbo now |
| 15:10 |
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jonalv |
that could be related... |
| 15:11 |
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jonalv |
probable is related... |
| 15:11 |
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shk3 |
i made sure the one in org.openscience.cdk is the same as net.bc.xml |
| 15:11 |
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shk3 |
net.bc.cml |
| 15:11 |
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shk3 |
any other place where a jumbo jar is in`? |
| 15:11 |
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gilleain |
it may or may not be relavant, but there's a mail on the cdk-devel list about the jumbo plugin from rajarshi. |
| 15:12 |
|
gilleain |
(a mail from him, not a plugin from him) |
| 15:13 |
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shk3 |
hm, I am using trunk (not 1.2.x) for bioclipse |
| 15:15 |
|
gilleain |
oh, right. not relevant then. |
| 15:24 |
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jonalv |
shk3: you switched my fixed version out? (my fixed version is renamed btw) |
| 15:25 |
|
egonw |
shk3: I think the svn:externals for BC2 is pointing to CDK 1.2.x |
| 15:25 |
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shk3 |
you mean cdk 1.2.x |
| 15:25 |
|
shk3 |
yes, it does |
| 15:25 |
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shk3 |
somehow |
| 15:25 |
|
shk3 |
but i removed 1.2.x from my workspace |
| 15:25 |
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jonalv |
gilleain: Yea that mail is about the version switching I have been up to... :/ |
| 15:25 |
|
shk3 |
just trunk in there |
| 15:26 |
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gilleain |
ahh. |
| 15:26 |
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shk3 |
so it should use trunk, if it uses anything |
| 15:29 |
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jonalv |
hm shk3 are you or are you not using my "fixed" jumbo? |
| 15:32 |
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gilleain |
he's gone somewhere |
| 15:33 |
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shk3 |
the loo |
| 15:33 |
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shk3 |
i am using trunk |
| 15:34 |
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shk3 |
with jumbo 5.4.2-b2 |
| 15:35 |
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jonalv |
ould you mind trying with the branch for me? |
| 15:35 |
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shk3 |
pardon? |
| 15:35 |
|
shk3 |
ah, sorry |
| 15:35 |
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shk3 |
will do so |
| 15:44 |
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egonw |
shk3: yes, only yhe branch has the fix for the class loading problem |
| 15:44 |
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egonw |
until I manage to merge 1.2.x with trunk |
| 15:53 |
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rojasm joined #bioclipse |
| 15:56 |
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shk3 |
jonalv: same problem |
| 15:57 |
|
shk3 |
cdk-1.2.x contains two jumbo jars (?). |
| 15:57 |
|
shk3 |
Is this correct? |
| 16:21 |
|
shk3 |
sorry, i have to leave |
| 16:21 |
|
shk3 |
let's discuss this tomorrow |
| 16:27 |
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| 16:28 |
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| 17:13 |
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| 17:21 |
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| 21:31 |
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| 23:51 |
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