Camelia, the Perl 6 bug

IRC log for #bioclipse, 2008-12-30

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All times shown according to UTC.

Time Nick Message
08:17 egonw joined #bioclipse
08:57 edrin joined #bioclipse
08:57 edrin hi
08:57 zarah hi edrin
08:57 edrin hi egonw
08:58 egonw hi edrin
08:58 zarah egonw: You have new messages. Write '/msg zarah @messages' to read them.
08:58 egonw @msg
08:58 zarah egonw: 11 h 43 m 36 s ago, masak said thanks for the Makefile -- egonw++
08:58 zarah egonw: 11 h 42 m 17 s ago, jonalv said The makefile doesn't do the same things as the shell script did... :(
08:58 zarah egonw: 11 h 39 m 31 s ago, masak said that's right. what you may not have realized is that the chapters sit in separate .tex files. so the Makefile thinks nothing needs to be done in situations when something actually needs to be done.
08:59 edrin egonw: i tried to write the scripting that checks for presence of a service, however the scripting console is till now not working for me
08:59 egonw in what way?
09:00 edrin it is just corrupt, i guess still the systems.newline \n thing
09:00 egonw what is?
09:00 egonw oh, that scripting console...
09:01 edrin yes
09:01 egonw yeah, masak is working on it...
10:51 jonalv joined #bioclipse
11:36 egonw http://chem-bla-ics.blogspot.com/2008/12/ed​iting-and-validation-of-cml-documents.html
11:36 zarah egonw's link is also http://tinyurl.com/7kz8vc
11:40 masak joined #bioclipse
11:41 * masak stumbles in like Caption Jack Sparrow
11:42 CIA-55 joined #bioclipse
12:10 olass joined #bioclipse
12:10 olass moin
12:10 zarah hi olass
12:11 * olass is on vacation
12:12 olass karma olass
12:12 zarah olass has a karma of 3
12:12 olass karma olas
12:12 zarah olas has a karma of 46
12:12 olass hmmm
12:12 olass masak: when I'm back to olas, will I get the olass karma added then?
12:13 olass meaning: is karma additive?
12:13 olass egonw: did you get the cml editor up and running?
12:30 egonw olass: yes: http://chem-bla-ics.blogspot.com/2008/12/ed​iting-and-validation-of-cml-documents.html
12:30 zarah egonw's link is also http://tinyurl.com/7kz8vc
12:30 egonw [13:11:50] * olass is on vacation
12:30 egonw again??
12:31 olass never got back
12:31 olass :-)
12:31 olass will work some on friday as well
12:31 olass part time today
12:31 olass and back on monday 5th for good
12:32 egonw olass: check that blog item... (we could use a bioclipse developers planet) ... and check pelezilla
12:32 egonw filed a bug against BC2 for you, regarding the XML editor the current BC2 has
12:32 egonw lunch
12:32 egonw bbl
12:33 olass egonw: (we could use a bioclipse developers planet) <- what does this mean?
12:33 olass and why?
12:33 olass I'll be happy to put you up as writer on bioclipse.blogspot.com
12:39 olass we have so few blog posts nowadays...
12:39 olass but I guess it's a good idea if we start writing more blog posts
12:39 olass I just think it takes too much time
12:39 masak always a good idea to write blog posts
12:40 olass I guess so
12:40 masak they have a very long tail of impact
12:40 olass maybe it IS worthwhile
12:40 olass and maube we should write more
12:40 masak olass: a planet is a collection of blogs
12:40 olass but that means less code
12:40 masak olass: it can also mean more devs
12:40 olass yeah, understood that after I read 2 times
12:41 olass masak: we really need a good document for new developers
12:41 masak olass: working on that :)
12:41 olass really good
12:41 olass it's just a too high barrier to start coding bioclispe nowadays
12:42 olass need to run off now
12:42 olass happy new year everyone!
12:42 olass bye
12:42 masak HNY
14:07 CIA-55 bioclipse: carl_masak * r8103 /bioclipse2/trunk/plugins/net.bioclipse​.scripting.ui/src/net/bioclipse/scripti​ng/ui/business/IJsConsoleManager.java: [IJsConsoleManager] annotation touch-up; no semantic change
14:09 egonw masak: how's the oneline input console getting along?
14:09 masak egonw: haven't looked at it in a while.
14:09 masak egonw: it's currently functional, but not very pretty.
14:09 egonw is it submitted?
14:09 masak do you mean committed? yes.
14:09 egonw I think edrin would be rather grateful, if he could use the console again
14:10 egonw yes, committed, indeed
14:10 masak egonw: I've asked him to use an older revision of the old console in the meantime.
14:10 egonw he reported this morning that it is still not working for him
14:11 masak egonw: I'm not sure he's actually followed that advice.
14:14 egonw well, how can he use the new console?
14:14 egonw the earlier it is tested, the better
14:15 masak egonw: he is welcome to try it.
14:15 masak I know it executes commands, but that's just about it.
14:15 masak it has no seatbelts, no cup-holder and no windshield.
14:16 egonw edrin: what d'you think?
14:25 masak oh, and no tab completion.
14:25 masak (IIRC)
14:49 CIA-55 bioclipse: carl_masak * r8104 /bioclipse2/trunk/plugins/net.bioclips​e.biojava.business/src/net/bioclipse/b​iojava/business/IBiojavaManager.java:
14:49 CIA-55 bioclipse: [IBioJavaManagers] fixed javadoc comments, added @PublishedClass
14:49 CIA-55 bioclipse: and @PublishedMethod annotations. much work remains to be done.
15:13 edrin well, working with the very old version is not nice, too... change characters are displayed and sometimes it is hard to find the cursor because it jumps somewhere...
15:14 edrin maybe i should just write .js files and run them... there you cant make much wrong
15:16 masak edrin: there ought to be a revision just before the NEWLINE change that would work quite fine for you.
15:54 masak egonw++ # Makefile
15:54 egonw oh, and it has texclipse support too now
15:54 egonw oh, and it has texlipse support too now
15:55 masak oh?
15:56 jonalv egonw: What has texlipse support?
15:56 jonalv egonw: The makefile still doesn't remove the toc file though...
15:57 egonw which toc?
15:57 jonalv book.toc
15:57 egonw it does
15:58 egonw here
15:58 jonalv not when it builds
15:58 jonalv only on cleanup right?
15:58 egonw LaTeX Warning: File `images/checkoutBioclipseSubclipse_1.png' not found on inpu
15:58 egonw ah, sure...
15:58 egonw ok, can do that...
15:58 masak oh, I get that warning too.
15:58 masak jonalv: forgot to svn add something?
15:59 jonalv try now...
15:59 jonalv =)
15:59 masak works better, aye.
15:59 jonalv been a while since I used commandline svn for commiting... =)
16:00 masak Preview++ # updates automatically when switched to
16:00 egonw jonalv: please up, and run make
16:00 masak jonalv: O RLY?
16:00 masak egonw: I just did.
16:00 egonw to rev 30?
16:00 masak aye
16:00 egonw ok
16:00 masak looks good.
16:01 egonw and 31
16:01 * masak ups
16:01 masak ah, props :)
16:02 jonalv nice egonw++
16:02 * masak removes superceded make.sh
16:12 * egonw goes offline to have dinner at the Greek downtown (the one at the riverside near the church)
16:14 * masak likes that restaurant
16:14 egonw bye all
16:43 masak left #bioclipse
17:39 edrin stain: available?
18:19 edrin left #bioclipse
20:27 egonw joined #bioclipse
22:32 edrin joined #bioclipse

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