Camelia, the Perl 6 bug

IRC log for #bioclipse, 2009-06-06

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All times shown according to UTC.

Time Nick Message
09:15 olass joined #bioclipse
09:16 olass @ping
09:16 zarah olass: pong
09:16 olass @ping
09:16 zarah olass: pong
09:16 olass @ping
09:16 zarah olass: pong
09:16 olass @ping
09:16 zarah olass: pong
09:55 CIA-40 bioclipse: ospjuth * r11075 /bioclipse2/trunk/bioclipse-updatesite/site.xml: Update site for RC1
09:56 CIA-40 bioclipse: ospjuth * r11076 /bioclipse2/trunk/experime​ntal-updatesite/site.xml: Experimental update site for RC1
10:17 CIA-40 bioclipse: ospjuth * r11077 /bioclipse2/trunk/plugins/net.biocl​ipse.ds/src/net/bioclipse/ds/model/ (ITestResult.java SimpleResult.java): Added a field for tracking the status of a TestResult as POSITIVE, NEGATIVE, or INCONCLUSIVE with proper default highlighting colors.
13:02 edrin joined #bioclipse
13:13 CIA-40 bioclipse: ospjuth * r11078 /bioclipse2/trunk/plugins/net​.bioclipse.ds.dblookup.bursi/ (icons/db.gif icons/test.gif plugin.xml): New icons for dblookup.
13:14 CIA-40 bioclipse: ospjuth * r11079 /bioclipse2/trunk/plugins/ne​t.bioclipse.ds.smarts.bursi/ (icons/form.gif icons/hit.png icons/test.gif plugin.xml): New icons for SMARTS test.
13:14 CIA-40 bioclipse: ospjuth * r11080 /bioclipse2/trunk/plugins/net​.bioclipse.ds.signsig.bursi/ (icons/form.gif icons/hit.png icons/test.gif plugin.xml): New icons for SignSig.
13:36 CIA-40 bioclipse: ospjuth * r11081 /bioclipse2/trunk/plugins/net.bioclipse.ds/ (icons/ icons2/): Removed deprecated icons.
13:37 CIA-40 bioclipse: ospjuth * r11082 /bioclipse2/trunk/plugins/net.bioclipse.ds/icons/ (26 files): Added new icons.
13:37 CIA-40 bioclipse: ospjuth * r11083 /bioclipse2/trunk/plugins/net.bi​oclipse.ds/src/net/bioclipse/ds/ (6 files in 2 dirs): Refactored TestHelper to business package and removed some unused classes.
13:38 CIA-40 bioclipse: ospjuth * r11084 /bioclipse2/trunk/plugins/net.bioclipse.ds/s​rc/net/bioclipse/ds/model/ITestResult.java: Added static status for ERROR and a detailedMessage for reporting. This replaced old ErrorResult.
13:39 CIA-40 bioclipse: ospjuth * r11085 /bioclipse2/trunk/plugins/net.bioclipse.ds​/src/net/bioclipse/ds/model/IDSTest.java: Cleaned up imports.
13:39 CIA-40 bioclipse: ospjuth * r11086 /bioclipse2/trunk/plugins/net.bioclipse.ds/s​rc/net/bioclipse/ds/model/SimpleResult.java: Added getIcon() and cache icons on SimpleResult instead of in label provider.
13:40 CIA-40 bioclipse: ospjuth * r11087 /bioclipse2/trunk/plugins/net.bioclipse.ds/src/​net/bioclipse/ds/model/SubStructureMatch.java: Removed overridden atom colors.
13:40 CIA-40 bioclipse: ospjuth * r11088 /bioclipse2/trunk/plugins/net.bioclipse.ds/src/n​et/bioclipse/ds/model/AbstractWarningTest.java: Adapted for ErrorResult removal.
13:42 CIA-40 bioclipse: ospjuth * r11089 /bioclipse2/trunk/plugins/net.bioclipse.ds​/src/net/bioclipse/ds/model/TestRun.java: Added cached images, a basic calculation of consensus results, and functionality to get icon and suffix from TestRun.
13:42 CIA-40 bioclipse: ospjuth * r11090 /bioclipse2/trunk/plugins/net.bioclipse.ds/s​rc/net/bioclipse/ds/business/DSManager.java: Cleaned up imports and removed outcommented manager methods.
13:43 CIA-40 bioclipse: ospjuth * r11091 /bioclipse2/trunk/plugins/net.bioclip​se.ds/src/net/bioclipse/ds/ui/views/ (3 files): Many icons, decoration, and suffixes has been pushed down to model level.
13:47 CIA-40 bioclipse: ospjuth * r11092 /bioclipse2/trunk/plugins/net.bioclip​se.ds/src/net/bioclipse/ds/ui/views/ (NoErrorsFilter.java TestsView.java):
13:47 CIA-40 bioclipse: * Listen for selections to update action states
13:47 CIA-40 bioclipse: * Removed NoErrorsFilter
13:47 CIA-40 bioclipse: * Activate view on first startup
13:47 CIA-40 bioclipse: * Replaced many icons
13:47 CIA-40 bioclipse: * Implemented doIncludeTests
13:47 CIA-40 bioclipse: * Adapted for status as static property on TestRun and removal of ErrorStatus
13:48 CIA-40 bioclipse: ospjuth * r11093 /bioclipse2/trunk/plugins/net.bioclipse.ds/ (.classpath plugin.xml): Updated view branding icon.
13:49 CIA-40 bioclipse: ospjuth * r11094 /bioclipse2/trunk/plugins/net.bioclipse.ds.d​blookup/src/net/bioclipse/ds/dblookup/impl/ (3 files): Adapted for API change in DS model and view.
13:49 CIA-40 bioclipse: ospjuth * r11095 /bioclipse2/trunk/plugins/net.bioclipse.ds.sm​arts/src/net/bioclipse/ds/smarts/model/impl/ (3 files): Adapted SmartsTest for API change in DS model and view.
13:50 CIA-40 bioclipse: ospjuth * r11096 /bioclipse2/trunk/plugins/net​.bioclipse.ds.signsig.bursi/ (7 files in 2 dirs):
13:50 CIA-40 bioclipse: * Renamed SignSic to SignSig (Signature Significance)
13:50 CIA-40 bioclipse: * Adapted SmartsTest for API change in DS model and view
13:50 CIA-40 bioclipse: * Removed SignSicHit since functionality now available in SubstructureResult
20:13 olass joined #bioclipse
22:27 rojasm joined #bioclipse

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