Camelia, the Perl 6 bug

IRC log for #bioclipse, 2009-07-02

| Channels | #bioclipse index | Today | | Search | Google Search | Plain-Text | summary

All times shown according to UTC.

Time Nick Message
04:13 CIA-52 joined #bioclipse
05:17 sneumann joined #bioclipse
05:21 egonw joined #bioclipse
06:11 egonw_ joined #bioclipse
06:50 Gpox joined #bioclipse
08:12 shk3 joined #bioclipse
08:14 egonw_ joined #bioclipse
08:17 egonw_ moin
08:17 zarah hi egonw_
08:41 sneumann joined #bioclipse
08:50 sneumann joined #bioclipse
09:16 CIA-52 bioclipse: goglepox * r11582 /bioclipse2/trunk/plugins/net.bioclipse.cd​k.jchempaint/src/net/bioclipse/cdk/jchempa​int/widgets/JChemPaintEditorWidget.java:
09:16 CIA-52 bioclipse: Sets atom type name to null if type is null.
09:16 CIA-52 bioclipse: Solves bug #1391
09:16 zarah bug #1391 | http://tinyurl.com/m365mk
09:21 egonw_ Gpox++
09:21 egonw_ thanx for looking into the issue!
09:25 masak joined #bioclipse
09:42 CIA-52 bioclipse: goglepox * r11583 /bioclipse2/trunk/plugins/net.bioc​lipse.cdk.ui.sdfeditor/plugin.xml:
09:42 CIA-52 bioclipse: Consolidated Calculate menu
09:42 CIA-52 bioclipse: Fixes bug #1389
09:42 zarah bug #1389 | http://tinyurl.com/m3pnt8
09:50 egonw_ Gpox: ping
09:50 egonw_ can you come over for a sec?
11:12 masak today's error report: errors in n.b.biomoby, n.b.biomoby.tests, n.b.ds.tests, n.b.qsar.ui, n.b.rdf.ui, n.b.services.embrace
11:13 egonw ha, zarah got extended with nightly error reporting
11:14 masak that'd be nice.
11:14 egonw we'll get there
11:18 masak zarah: we should build some kind of nightly error reporting.
11:18 zarah masak: excuse me?
11:18 masak zarah: you should have some kind of nightly error reporting built in.
11:18 zarah masak: Hokay. You provide the commits, I provide the "should"-ing
11:18 masak that's a good division of labour.
11:32 CIA-52 bioclipse: goglepox * r11584 /bioclipse2/trunk/plugins/ (3 files in 2 dirs):
11:32 CIA-52 bioclipse: Added copyright/license statement
11:32 CIA-52 bioclipse: see bug #1333
11:32 zarah bug #1333 | http://tinyurl.com/nz9aff
11:41 CIA-52 bioclipse: egonw * r11585 /bioclipse2/trunk/plugins/net.bioclipse.cd​k.jchempaint/src/net/bioclipse/cdk/jchempa​int/widgets/JChemPaintEditorWidget.java: Erase old atom type properties which is confusing the CDKAtomTyper (files as CDK bug #2815727)
11:41 zarah bug #2815727 | http://tinyurl.com/nnsskk
11:43 olass joined #bioclipse
11:45 egonw masak: feature request: recognize "cdk bug #foo"
11:46 egonw masak: number can be embedded in: https://sourceforge.net/tracker/?func=detail&amp​;aid=2815727&group_id=20024&atid=120024
11:46 egonw aid == bug number
11:46 masak egonw: you got it.
11:56 CIA-52 bioclipse: carl_masak * r11586 /bot/trunk/zarah.pl:
11:56 CIA-52 bioclipse: [zarah] now reports cdk bugs
11:56 CIA-52 bioclipse: She triggers on /cdk bug #\d+/, uttered by a CIA bot in the cdk channel.
11:56 masak zarah: reboot, dear.
11:56 zarah joined #bioclipse
11:57 masak egonw: there. let me know if it works.
12:00 egonw it works on all channels?
12:01 egonw btw, masak++
12:01 masak egonw: no, only cdk, bioclipse and farmbio.
12:01 masak and only in commit messages.
12:01 masak (just like the corresponding bioclipse bug ticket syntax)
12:01 egonw yeah, fine, thanx!
12:02 masak feel free to tweak the conditions to your liking, though.
12:02 masak they're on lines 1122 and 1123 in zarah.pl.
12:13 egonw http://timoelliott.com/blog/2009/07/t​est-your-decision-making-skills.html
12:13 zarah egonw's link is also http://tinyurl.com/lhxqlp
12:15 CIA-52 bioclipse: carl_masak * r11587 /bot/trunk/Dialogue.pm:
12:15 CIA-52 bioclipse: [Dialogue] class is now made immutable
12:15 CIA-52 bioclipse: This speeds up execution. See
12:15 CIA-52 bioclipse: http://search.cpan.org/~drolsky/Moose-0.​85/lib/Moose/Cookbook/Basics/Recipe7.pod
12:15 CIA-52 bioclipse: for details.
12:15 zarah CIA-52's link is also http://tinyurl.com/mbn5vz
12:15 Gpox git log --pretty=format:"%an" --diff-filter=A --follow -M $1
12:18 CIA-52 bioclipse: carl_masak * r11588 /bot/trunk/zarah.pl: [zarah] now hangs out in #perl6-soc
12:26 lc__ joined #bioclipse
12:29 lc__ egonw or olass: Can you plz give me the basic steps in setting up jniicnhi on a system?
12:29 lc__ I've already compiled the inchi code.
12:30 lc__ Inchi in Bioclipse doesnt work for me on RHEL 4
12:34 olass lc__: I have never done that
12:34 olass egonw: can you assist?
12:34 Gpox yes
12:35 olass lc__: talked to egonw IRL, he's in a meeting
12:35 lc__ ok
12:36 olass but he will assist with this after that
13:02 Gpox git++
13:02 CIA-52 bioclipse: carl_masak * r11589 /bot/trunk/zarah.pl:
13:02 CIA-52 bioclipse: [zarah] now has tutorial functionality
13:02 CIA-52 bioclipse: There are three unwritten tutorials in there. Will write them shortly.
13:03 egonw the titles?
13:03 egonw 1. commit messages
13:03 egonw 2. white space
13:03 egonw 3. ?
13:03 zarah joined #bioclipse
13:03 masak egonw: tell, karma, plan.
13:03 egonw @zarah tell
13:04 egonw @zarah tutorial tell
13:04 egonw @tutorial tell
13:04 zarah egonw: Sure, I'll give you the tour. Just write'/msg zarah @tutorial' to get started.
13:04 egonw masak: maybe add a tutorial about @tutorial ? :)
13:04 masak :)
13:04 masak hm, a few bugs in there.
13:05 * masak fixes
13:07 CIA-52 bioclipse: carl_masak * r11590 /bot/trunk/zarah.pl:
13:07 CIA-52 bioclipse: [zarah] now justifies tutorial index properly
13:07 CIA-52 bioclipse: Also, fixed fallthrough issues with a few return statements.
13:08 CIA-52 bioclipse: carl_masak * r11591 /bot/trunk/zarah.pl: [zarah] added missing space
13:08 zarah joined #bioclipse
13:14 CIA-52 bioclipse: carl_masak * r11592 /bot/trunk/zarah.pl: [zarah] made tutorial index more suggestive
13:14 CIA-52 bioclipse: carl_masak * r11593 /bot/trunk/zarah.pl: [zarah] now reports missing topics correctly
13:15 zarah joined #bioclipse
13:17 CIA-52 bioclipse: carl_masak * r11594 /bot/trunk/zarah.pl:
13:17 CIA-52 bioclipse: [zarah] really fixed missing topic reporting
13:17 CIA-52 bioclipse: That extra parenthesis was the culprit.
13:17 zarah joined #bioclipse
13:29 zarah joined #bioclipse
13:29 CIA-52 bioclipse: carl_masak * r11595 /bot/trunk/zarah.pl: [zarah] wrote the karma tutorial
13:30 masak please let me know what you think. :)
13:32 CIA-52 bioclipse: carl_masak * r11596 /bot/trunk/zarah.pl: [zarah] added friendly 'end of tutorial' message
13:50 CIA-52 bioclipse: carl_masak * r11597 /bot/trunk/zarah.pl: [zarah] wrote tell tutorial
13:51 zarah joined #bioclipse
13:51 maclean joined #bioclipse
14:05 stain joined #bioclipse
14:31 CIA-52 bioclipse: carl_masak * r11598 /bot/trunk/zarah.pl: [zarah] wrote plan tutorial
14:32 zarah joined #bioclipse
14:39 masak I'd recommend you all to '/msg zarah tutorial plan' when you have the time.
14:47 CIA-52 bioclipse: carl_masak * r11599 /bot/trunk/zarah.pl: [zarah] made tutorial menu even clearer
14:49 zarah joined #bioclipse
14:54 * olass is building RC5
14:54 masak olass+
14:54 masak olass++
14:54 masak olass+++
14:54 olass masak: keep going :)
14:54 masak :P
14:54 olass olas++++
14:54 olass @ping
14:54 zarah olass: pong, honey
14:55 masak olas--
14:55 olass what!?
14:55 olass olass++++
14:55 zarah shame on you, olass, giving yourself karma like that
14:55 olass ah
14:55 olass you saw that ;)
14:55 masak mm.
18:00 sneumann joined #bioclipse
20:23 sneumann_ joined #bioclipse

| Channels | #bioclipse index | Today | | Search | Google Search | Plain-Text | summary