Camelia, the Perl 6 bug

IRC log for #bioclipse, 2009-10-14

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All times shown according to UTC.

Time Nick Message
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08:17 samuell egonw: FYI, I just run and passed the first Java/Prolog test.
08:17 samuell > blipkit.test()
08:17 samuell Result: passed.
08:18 samuell That is, while it might not be the final and correct solution, it seems to work to some extent.
08:19 samuell Oops, I see egonw is not online yet.
08:21 egonw_ joined #bioclipse
08:23 samuell egonw: FYI, I just run and passed the first Java/Prolog test.
08:23 samuell > blipkit.test()
08:23 samuell Result: passed.
08:23 samuell That is, while it might not be the final and correct solution, it seems to work to some extent.
08:23 samuell Oops, I see egonw is not online yet.
08:23 samuell - the last line
08:24 egonw_ I am now
08:24 samuell Yep
08:24 egonw_ saw your lines
08:24 egonw_ blipkit.test() is a manager method
08:24 samuell Yes
08:24 egonw_ and it calls swi-prolog?
08:24 samuell Yes
08:24 egonw_ so, it load properly now?
08:25 egonw_ loadS
08:25 samuell It seems so, by what I can see
08:25 egonw cool
08:25 egonw so, next manager method:
08:25 samuell The Eclipse log says:
08:25 samuell % library(swi_hooks) compiled into pce_swi_hooks 0.00 sec, 2,060 bytes
08:25 samuell % /home/samuel/.plrc compiled 0.00 sec, 660 bytes
08:25 samuell % /home/samuel/test.pl compiled 0.00 sec, 1,300 bytes
08:25 egonw blipkit.run("foo()") or os
08:25 egonw nice
08:25 egonw or so
08:26 samuell Yep. Will have look into the examples to see how to work with the jpl
08:27 samuell Btw, the library (libjpl.so) is loaded from a function named "jpl.JPL.loadNativeLibrary"
08:27 egonw jonalb and I were just discussion something we need *after* your project...
08:28 egonw like a prolog editor...
08:28 samuell Ok
08:28 egonw so that you can edit your stuff there
08:28 egonw and then pass it to blipkit...
08:28 samuell Yep, would be useful
08:28 egonw but again, that's after your project
08:28 egonw just googled this:
08:28 egonw http://eclipse.ime.usp.br/projetos/gra​d/plugin-prolog/index.html#Screenshots
08:28 zarah egonw's link is also http://tinyurl.com/m35mx3
08:29 samuell Nice. BTW, is there a general "editor" plugin for Bioclipse now?
08:29 jonalv joined #bioclipse
08:29 egonw like a plain text editor?
08:30 samuell Yeah, thinking that it might be good to build upon a general one...
08:30 samuell I guess there are plenty of possible needs for editors in Bioclipse
08:31 samuell But, anyway. That's a later problem, as you said.
08:36 egonw jonalv: http://cdk.svn.sourceforge.net/viewvc/​cdk/cdk-fingerprint-paper/trunk/data/
08:36 zarah egonw's link is also http://tinyurl.com/yffk2zy
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08:44 egonw jonalv: http://cdk.svn.sourceforge.net/viewvc/cdk/c​dk-fingerprint-paper/trunk/data/muv/aid712/
08:44 zarah egonw's link is also http://tinyurl.com/yfoa9tg
08:44 egonw jonalv: that has the .smi files
08:44 egonw hi olass
08:44 olass o/
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09:10 samuell olass: Feel free to suggest a date for wiki upgrade.
09:10 olass samuell: after 22 Oct at least (my deadline)
09:11 samuell olass: Ok
09:11 olass possibly tues 27th Oct
09:11 samuell Ok
09:11 olass should we prel schedule this?
09:11 samuell For me we can
09:11 * olass has marked it in his calender
09:12 samuell But we could check with the others if they are here too then
09:12 olass you and me is enough
09:12 olass to get started
09:12 samuell Well. True
09:12 olass but of course better if more people here
09:13 samuell Yep. It would be good to have a short discussion on main "content types" etc then.
09:13 olass sounds good
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09:31 egonw Gpox: box in 15 minutes?
09:32 Gpox ok
09:33 jonalv joined #bioclipse
09:41 samuell egonw:Could you complement the missing details in the Project info box at http://wiki.bioclipse.net/​index.php?title=CDK_plugin
09:41 zarah samuell's link is also http://tinyurl.com/yz2v7cy
09:42 samuell (I'm myself looking for where to check it out)
09:43 samuell (When you have time, of course)
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