Camelia, the Perl 6 bug

IRC log for #bioclipse, 2010-01-21

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All times shown according to UTC.

Time Nick Message
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07:29 CIA-58 bioclipse.rdf: Egon Willighagen 2.2.x * reff2a33 / (2 files in 2 dirs): Exposed importFromStream() via the public interface (with unit test) - http://bit.ly/5ybaXl
07:29 CIA-58 bioclipse.rdf: Egon Willighagen 2.2.x * reff2a33 / (2 files in 2 dirs): Exposed importFromStream() via the public interface (with unit test) - http://bit.ly/5ybaXl
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08:52 Topic for #bioclipseis now An open source workbench for chem- and bioinformatics - http://www.bioclipse.net/ | BioclipseWiki => http://wiki.bioclipse.net/ !! | logs => http://colabti.org/irclogge​r/irclogger_logs/bioclipse & http://moritz.faui2k3.org/irc​log/out.pl?channel=bioclipse || Bioclipse2 beta released! See http://bioclipse.blogspot.com/ || http://www.youtube.com/watch?v=ZUBQknWUEYU
09:04 edrin joined #bioclipse
09:04 edrin hi
09:04 zarah oh hai edrin
09:05 edrin maybe we can turn off this irc-bot saying "hi"...
09:08 masak joined #bioclipse
09:08 edrin hi masak
09:09 masak greetings edrin
09:09 egonw oh hai edrin
09:10 edrin :]
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09:29 jwyh jonalv: Hi Jonathan
09:30 egonw jwyh: jason?
09:30 jwyh jonalv: Yep
09:30 jonalv hi jwyh
09:30 masak oh hai jwyh!
09:30 jonalv hi egonw
09:30 jonalv oh hai all :)
09:30 jwyh Are you and Carl up for hammering out the benchmark tasks?
09:31 jonalv masak: I think he means you
09:31 masak jonalv: no, pretty sure he means you.
09:32 jonalv masak: although we both have the name Carl I think when people say Carl they tend to mean you
09:32 jwyh Hahaha. Okay, so we should preprend with the name and : ?
09:32 masak that's a solution.
09:32 masak Einstein: hey, I have a question about a constant!
09:33 jonalv masak: who are you calling Einstein?
09:33 egonw Gpox: can we stop this crap?
09:33 masak jonalv: take a guess, Einstein.
09:33 jonalv LOL
09:33 egonw oops...
09:33 egonw God: can we stop this crap?
09:33 egonw damn autocomplete :)
09:33 * masak often mixes up those two as well...
09:33 egonw Gpox: sorry!
09:34 egonw masak++
09:34 egonw Gpox++
09:34 jonalv jwyh: What did you have in mind?
09:34 masak God++
09:34 jonalv Einstein++
09:34 egonw God--
09:34 masak karma God
09:34 zarah God has a karma of 0
09:34 egonw (for nothing taking things into hand)
09:34 masak well, can't win'em all.
09:34 egonw I think mankind has shown uncapable...
09:34 masak mankind--
09:35 egonw I mean, how long does God need to realize the human race sucks
09:35 masak jwyh: how do you like our signal/noise ratio? :)
09:35 jonalv egonw: ssshh he might hear you
09:35 egonw I mean... there is a moment you should just declare an experiment failed
09:35 jwyh He probably already knew the human race sucks
09:35 masak jwyh: mind you, we're not always this cogent...
09:37 jonalv jwyh: What did you have in mind?
09:37 jwyh I can come round and we can define the tasks and their elementary steps?
09:37 jwyh If you guys have time either today or tomorrow
09:38 jonalv jwyh: oh IRL? hm yea I guess, masak you joinining in?
09:38 jwyh We can then meet Mats early next week
09:38 masak I'm always ready.
09:38 jwyh What's IRL?
09:38 masak I have another meeting right after lunch, though.
09:38 jonalv We are three people in here so maybe we should move into another room
09:38 jonalv google IRL
09:38 zarah jonalv: http://www.indycar.com/
09:38 masak In Real Luftbaloons.
09:38 jonalv lol
09:39 masak s/loo/lloo/
09:39 jwyh What's lol?
09:39 jonalv google 'define: irl'
09:39 zarah jonalv: http://www.urbandictionary.​com/define.php%3Fterm%3Dirl
09:39 masak Lots of Luftballoons
09:39 jonalv google 'define: lol'
09:39 zarah jonalv: http://www.acronymfinder.com/lol.html
09:40 masak jwyh: lol means 哈哈哈
09:40 jwyh Your Chinese is far better than mine
09:41 masak quite monotonous, though.
09:41 masak 哈哈哈哈哈...
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12:06 olass hi
12:06 zarah ni hao olass
12:18 samuell joined #bioclipse
12:24 egonw hi samuell
12:25 samuell hello egonw
12:31 samuell egonw: Btw, the meeting with Mats was not possible as early as ẃe suggested (28th of Jan or 4th of Feb)
12:31 samuell So he asked to come back about it later
12:32 egonw OK
12:42 samuell egonw: Looking at the "property chaining" chat now
12:43 samuell thanks for hinting about my work there :)
12:43 samuell Right now, I have hopes of being able to express the nmr-spectrum similarity with owl ... found the "math" "property"
12:53 egonw sounds good
12:54 egonw samuell: http://sunsite.informatik.rwth-aach​en.de/Publications/CEUR-WS/Vol-559/
12:54 zarah egonw's link is also http://tinyurl.com/yl6zb23
12:56 samuell Thx!
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13:32 * egonw is done writing the Call for Proposals for the RDF symposium at the fall ACS National Meeting & Exposition in Boston in August
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13:34 egonw olass: did you get my patch for bioclipse.qsar for isValidDescriptor ?
13:35 zarah joined #bioclipse
13:36 egonw olass: I also got a ping from you about setting to RC3 for bioclipse.social
13:37 egonw but as far as I can see, it is already set to that...
13:46 olass egonw: ok..
13:46 olass I did a pull first but did not notice
13:46 olass if RC3, please disregard my pull request
13:46 egonw branch or master?
13:46 CIA-58 bioclipse.social: Egon Willighagen master * rd1de2f2 / features/net.bioclipse.social_feature/feature.xml : Added full LGPL text of jtwitter (fixes #1762) - http://bit.ly/4I6VM3
13:46 zarah bug #1762 | http://tinyurl.com/y89lgml
13:46 CIA-58 bioclipse.social: Egon Willighagen master * rd227664 / (4 files in 3 dirs): Bumped version to 2.2.0.RC3 - http://bit.ly/7D2kLT
13:47 olass branch 2.2.x
13:47 egonw now merged 2.2.x into master
13:47 egonw weird
13:47 olass yup
13:47 olass well, fixed anyway. That is most important
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15:00 CIA-58 bioclipse.core: Ola Spjuth 2.2.x * rd33b85f / plugins/net.bioclipse.scripting.ui/src/net/bi​oclipse/scripting/ui/views/JsConsoleView.java :
15:00 CIA-58 bioclipse.core: Removed Java 1.6 syntax.
15:00 CIA-58 bioclipse.core: @Override must override a superclass function. - http://bit.ly/4wv31M
15:00 olass joined #bioclipse
15:01 olass hi again
15:02 CIA-58 bioclipse.core: jonalv jonalv-newFromClipboard * r9792be9 / plugins/net.bioclipse.ui.business/plugin.xml : started writing xml for commands & handlers - http://bit.ly/5G3E6t
15:11 jonalv` @ping
15:11 zarah jonalv`: pong
15:17 jonalv joined #bioclipse
15:19 olass @pong
15:20 olass zarah: pong
15:20 olass zarah?
15:20 olass zarah: PONG
15:20 zarah olass: please rephrase or stop trying to be witty :)
15:20 olass :/
15:20 * jonalv got stuck with a git problem now. That was really not something that I needed :(
15:22 sneumann karma git
15:22 zarah git has a karma of 39
15:22 olass karma sneumann
15:22 zarah sneumann has a karma of 9
15:22 olass sneumann++
15:23 olass ;)
15:23 masak git++
15:24 * jonalv hasn't quite figured out how to work wiht git against egonw's chemoinformatics repo. He sometimes accept my patches and sometimes not so I always seem to end up with commits in my ree which he has rejected... :(
15:29 * sneumann has the problem with git-svn that 1) he can't review what gets "git svn dcommit"ed, and at least once  2) has dcommitted stuff from other local git branches inadvertedly
15:30 jonalv sneumann: ah yea I can see how that could be a problem
15:35 sneumann I guess you'd best have one git repo with svn as beckend,
15:35 sneumann and your git-only repo with all your branches
15:35 sneumann and pull from there into the git-svn
15:35 sneumann so you exactly know what gets pulled
15:35 sneumann before dcommit'ing
15:35 sneumann where's egonw if you need him :-)
15:40 jonalv sneumann: yea that sounds like a good way of doing it
16:17 jonalv olass: it seems structuredb runs with 2.2.x but I do get some strange errors from JCHempaint and the molecules table. I guess that is okey on the experimental site though...
16:19 olass jonalv: ok
16:49 masak "The Bioclipse Software Development Kit is a set up Eclipse plugin to facility development of Bioclipse plugins." http://pele.farmbio.uu.se/cg​i-bin/bugzilla/enter_bug.cgi
16:49 zarah masak's link is also http://tinyurl.com/ykltbwc
16:49 masak s/facility/facilitate/
16:49 masak but egonw is not here... :/
16:50 masak zarah: tell egonw "The Bioclipse Software Development Kit is a set up Eclipse plugin to facility development of Bioclipse plugins." http://pele.farmbio.uu.se/cg​i-bin/bugzilla/enter_bug.cgi s/facility/facilitate/
16:50 zarah masak's link is also http://tinyurl.com/ykltbwc
16:50 zarah Consider it noted.
16:59 egonw joined #bioclipse
17:00 olass hi egonw
17:00 egonw hi olass
17:00 zarah egonw: You have new messages. Write '/msg zarah @messages' to read them.
17:00 egonw @msg
17:00 zarah egonw: 10 m 25 s ago, masak said "The Bioclipse Software Development Kit is a set up Eclipse plugin to facility development of Bioclipse plugins." http://pele.farmbio.uu.se/cg​i-bin/bugzilla/enter_bug.cgi s/facility/facilitate/
17:00 masak I could submit that as a bug ticket, but I thought I'd mention it here first :)
17:00 egonw please submit
17:01 egonw about to go for dinner... and test beamer-laptop for wedding tomorrow in about 60 minutes
17:01 masak sure thing.
17:02 olass egonw: will you be at BMC next week?
17:02 egonw yes
17:02 olass sounds good
17:10 edrin anyone of the ppl here is going to get married tomorrow?
17:10 egonw AFAIK, not of the people here...
17:10 egonw but I have a relative who gets married tomorrow
17:11 edrin ahso
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