Camelia, the Perl 6 bug

IRC log for #bioclipse, 2010-04-01

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All times shown according to UTC.

Time Nick Message
04:09 egonw_ joined #bioclipse
07:00 Gpox joined #bioclipse
07:08 s_wolf joined #bioclipse
07:56 egonw_ joined #bioclipse
08:02 egonw_ Gpox: ping, got a sec?
08:02 egonw_ Gpox: you're not at BMC are you?
08:02 Gpox no
08:03 egonw_ trying to export Bioclipse
08:03 egonw_ but I get this nattable issue
08:03 egonw_ Missing requirement: Bioclipse Chemoinformatics 2.2.0.v20100127 (net.bioclipse.chemoinforma​tics_feature.feature.group 2.2.0.v20100127) requires 'net.sourceforge.nattable.core [2.0.0.201004011000]' but it could not be found
08:04 egonw_ but my local repos has a 20090824000 version
08:04 egonw_ and I cannot find where that 2010 version comes from
08:06 Gpox from the build process maybe
08:06 egonw_ how?
08:06 egonw_ the version does seem to indicate that
08:06 egonw_ the last four digits match the time on my laptop
08:07 egonw_ but I don't understand how to get Eclipse to see the plugin
08:07 egonw_ I've reset target platform many times now
08:07 egonw_ and the 2.0.0 version there should be OK, I guess
08:08 Gpox nattable is not in 2.2 "Chemoinformatics 2.2.0.v20100127"
08:09 egonw_ it is here
08:12 sneumann joined #bioclipse
08:12 Gpox it could have something to do with that the nattable version is 2.0.0.qualifier
08:13 egonw_ yeah, I'm already testing that
08:13 egonw_ changed the MANIFEST.MF and rejared
08:18 egonw_ export in progres... fingers crossed ...
08:23 egonw_ cool, that seems to have fixed it...
08:23 egonw_ Gpox: advice... shall I commit the new jar?
08:24 Gpox sure, wont work to export otherwise
08:26 CIA-22 bioclipse.core: Egon Willighagen master * r55d5594 / net.bioclipse.target.platform/libs/net.sourc​eforge.nattable.core_2.0.0.200908240000.jar : Fixed METAINF.MF of jar, to give the proper version 2.0.0.20090824000 instead of 2.0.0.qualifier, which made the export fail - http://bit.ly/9EqlUb
08:28 egonw_ ok, installed delta pack
08:28 egonw_ hoping that it also exports nicely for windows
08:31 egonw_ resetting target platform
09:29 jonalv joined #bioclipse
09:29 jonalv oh hai
09:29 zarah saluton jonalv
09:29 zarah jonalv: You have new messages. Write '/msg zarah @messages' to read them.
09:45 olass joined #bioclipse
10:08 masak joined #bioclipse
10:51 egonw joined #bioclipse
11:25 samuell joined #bioclipse
11:30 egonw http://chem-bla-ics.blogspot.com/2010/04/o​pentox-virtual-seminar-thursday-april.html
11:30 zarah egonw's link is also http://tinyurl.com/yazcjhq
12:27 CIA-22 bioclipse.core: Arvid Berg master * r9ee2f04 / (3 files in 3 dirs):
12:27 CIA-22 bioclipse.core: Updated the quickimage plugin
12:27 CIA-22 bioclipse.core: It now relies on the feature found at update-site:
12:27 CIA-22 bioclipse.core: http://psnet.nu/eclipse/updates
12:27 CIA-22 bioclipse.core: If you are not using the new-target-platform you have to
12:27 CIA-22 bioclipse.core: install this into your eclipse instalation. - http://bit.ly/9W45tW
12:27 CIA-22 bioclipse.core: Arvid Berg master * re758584 / (27 files in 9 dirs): Removed nu.psnet.quickimage from externals - http://bit.ly/cNWQjx
12:28 zarah CIA-22's link is also http://tinyurl.com/ybb2sku
12:28 egonw Gpox: could you please write up in the wiki how to use the new target platform?
12:28 egonw even if it is as simple as opening it, and hit 'set target platform'?
12:28 egonw and notify people on bioclipse-devel?
12:29 egonw (or did you already, and I just missed it?)
12:29 Gpox open it click 'Set as Target Platform'
12:53 egonw Gpox: where does it cache downloaded bundles?
12:54 egonw I hope it does, because it is bloody slow
12:57 Gpox metadata/.plugins/org.ecli​pse.pde.core/.bundle_pool I think
13:11 olass joined #bioclipse
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13:32 egonw Gpox:
13:32 egonw An internal error occurred during: "Resolving Target Definition".
13:32 egonw Profile TARGET_DEFINITION:resource:/net.bioclipse.​target.platform/new-target-platform.target is not current.
13:32 egonw what can I do about that?
13:38 Gpox egonw: dunno, try going to Preferences->Plug-in Development->Target Platform, might give you more info
13:39 olass reset TP does not work?
13:50 samuell joined #bioclipse
14:02 egonw olass: was testing Gpox's new target platform thing with update sites
14:03 olass cool
14:07 egonw Gpox: it's complaining about the Mylyn feature you have listed in the target def
14:07 egonw or is that just in my local copy?
14:07 egonw I can remove it not?
14:07 egonw at least it should use a Mylyn update site instead...
14:08 Gpox maybe
14:08 egonw the safe answer
14:12 Gpox iirc there was some plugin that was needed that Mylyn suplied, it was an easy way out
14:13 egonw http://biostar.stackexchange.com/questions​/559/which-google-summer-of-code-projects-​are-available-for-bioinformatics-in-2010
14:13 zarah egonw's link is also http://tinyurl.com/yfe9a4z
14:14 egonw Gpox: it did pick up a Mylyn feature from the Galileo website already
14:14 egonw removing it does not seem to cause a problem
14:14 egonw not for me anyway
14:15 egonw olass: please move the 2.4 release date one or two weeks down the time line
14:15 egonw I will not be able to fix many bugs before the release
14:18 olass jonalv, masak, Gpox: what do you think about moving 2.4 1-2 weeks down?
14:18 masak fine by me.
14:18 olass it seems reasonable since I have not had time to even get an RC out yet
14:18 olass damn that building
14:18 masak nodnod
14:18 * olass wants auto builds
14:19 egonw olass: I fixed one export bug today :)
14:20 egonw olass: thanx
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17:42 egonw joined #bioclipse
17:45 Gpox @pz 1657
17:45 zarah http://pele.farmbio.uu.se/cgi-bi​n/bugzilla/show_bug.cgi?id=1657
20:34 samuell joined #bioclipse

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