Camelia, the Perl 6 bug

IRC log for #bioclipse, 2010-07-12

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All times shown according to UTC.

Time Nick Message
01:37 slyrus_ joined #bioclipse
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09:13 de__maas Hi everybody, before filing a bug. Does anybody now about bioclipse crashing after installing birt. I've this problem with 2.2 and 2.4 on windows Vista and redhat.
09:22 de__maas olass: morning Ola
09:23 olass de__maas: good morning
09:23 olass de__maas: please file a bug
09:23 olass we have quite big problems with Birt overall
09:23 olass if it crashes Win, we must remove it from our update site
09:24 olass we are thinking of replacing BIRT with JasperReports
09:24 de__maas olass: OK, I'll will . I was hoping to use the descision support but I can't get it installed.
09:24 olass well, DS should work without BIRT if you omit the DS_BIRT feature
09:24 olass de__maas: but DS really is in experimental mode
09:24 olass I am currently working on it
09:25 olass so what is online is really just a proof-of-concept
09:25 olass but glad if you take a look at it and report bugs ;)
09:25 de__maas OK, i'll see if I can get it running without birt but I think the installer is requiring it.
09:25 olass that should not be the case
09:26 olass make sure you don't check the ds_birt
09:26 olass that is just an optional feature
09:26 olass and BIRT currently is _vary_ shaky
09:26 olass very
09:26 de__maas Nice song: standing on shaky ground ;-)
09:26 * olass has spent a lot of time with BIRT
09:26 olass yes, sad
09:27 olass that's why I guess we must drop it in favor of another reporting framework
09:27 * olass never liked BIRT anyway
09:27 de__maas Well it's suppose to help you so if not, get rid of it.
09:28 de__maas BTW, the update site is also a bit shaky at the moment.
09:29 edrin joined #bioclipse
09:29 edrin hi
09:29 zarah oh hai edrin
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10:58 CIA-71 bioclipse.ds: Ola Spjuth master * r5057a6d / (6 files in 4 dirs): Added a plugin wrapping libsvm.jar. - http://bit.ly/b6Cl8K
10:58 CIA-71 bioclipse.ds: Ola Spjuth master * r8001323 / (9 files in 7 dirs): Removed libsvm jars and depend on libsvm plugin. - http://bit.ly/ctp3YK
11:01 CIA-71 bioclipse.ds: Ola Spjuth master * r2edbd0a / features/net.bioclipse.ds_feature/feature.xml : added libsvm to ds.feature - http://bit.ly/aH78Or
11:52 CIA-71 bioclipse.ds: Ola Spjuth master * re786dd2 / (102 files in 30 dirs): Renamed DS projects *.bursi.* to *.ames.* - http://bit.ly/9GPidi
12:26 CIA-71 bioclipse.ds: Ola Spjuth master * r7d7e10b / (35 files in 21 dirs): Renamed cpdb.signatures to cpdb.sign - http://bit.ly/d8deKh
13:00 CIA-71 bioclipse.ds: Ola Spjuth master * r7f9a7ae / (6 files in 4 dirs): Added ExternalLibrary docu for libsvm - http://bit.ly/c5ORNV
13:00 CIA-71 bioclipse.ds: Ola Spjuth master * ra5bba68 / (4 files in 2 dirs): Added ExternalLibrary docu for Signatures. - http://bit.ly/diOWxn
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14:42 CIA-71 bioclipse.ds: Ola Spjuth master * rc0a218d / (2 files): Removed deprecated data files. (+5 more commits...) - http://bit.ly/9Rpa3R
14:48 slyrus morning bioclipsians
15:07 samuell Morning :) (5 pm here, but that's about morning for me too)
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22:17 Juul Hi. I'm wondering if there is a guide, or list of features for the bioinformatics plugin? The only thing I've managed to do so far is load up a fasta sequence and switch between source and graphical sequence views.
22:43 samuell Hello Juul, that question would be the best to ask masak (unfortunatly not online now)
22:43 Juul ok, i'll check back later
22:44 samuell Otherwise you can ask on the bioclipse-users list if you want: https://lists.sourceforge.net/​lists/listinfo/bioclipse-users
22:44 Juul ok thanks :)
22:47 samuell Might be the best since most bioclipse developers are located in Europe, so it will be a bit of time diff to US :)
22:52 Juul ah
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