Camelia, the Perl 6 bug

IRC log for #bioclipse, 2010-08-10

| Channels | #bioclipse index | Today | | Search | Google Search | Plain-Text | summary

All times shown according to UTC.

Time Nick Message
05:11 egonw joined #bioclipse
05:25 sneumann__ joined #bioclipse
06:45 masak joined #bioclipse
06:52 CIA-71 joined #bioclipse
07:24 Gpox joined #bioclipse
07:30 jonalv joined #bioclipse
07:31 jonalv hi
07:31 zarah privet jonalv
07:32 masak oh hai
07:32 zarah hi masak
07:46 s_wolf joined #bioclipse
08:00 egonw joined #bioclipse
08:08 s_wolf moin
08:08 zarah saluton s_wolf
08:54 masak joined #bioclipse
09:02 egonw joined #bioclipse
09:29 CIA-71 bioclipse.ds: Ola Spjuth master * r86b9e16 / (3 files in 2 dirs): Updated signature alerts for cpdb. - http://bit.ly/a4kjpt
09:34 Juul joined #bioclipse
09:39 egonw_ joined #bioclipse
09:41 egonw_ bioclipse-commit@lists.sf.net
09:41 jonalv joined #bioclipse
09:41 egonw_ bioclipse-commit@lists.sf.net
09:43 egonw_ mgerlich, s_wolf, sneumann__: we're moving repositories...
09:43 egonw_ everything is moving to github.com/bioclipse/
09:44 egonw_ you can update your local bioclipse.foo/.git/config files, so that you do not need to make new checkouts/clones
09:45 samuell joined #bioclipse
09:47 egonw_ look for the [remote XXX] sections
09:47 egonw_ and change the url = line for the origin
09:47 egonw_ which probably just comes down to, for example:
09:47 egonw_ replace:
09:47 egonw_ git@github.com:egonw/bioclipse.cheminformatics.git
09:47 egonw_ by
09:48 egonw_ git@github.com:bioclipse/bioclipse.cheminformatics.git
09:48 egonw_ so, replace GitHub user account by just 'bioclipse'
09:48 egonw_ which is an "organization account"
09:49 olass joined #bioclipse
09:49 egonw_ olass: http://gist.github.com/517004
09:51 olass danke
10:07 s_wolf danke
10:23 egonw_ joined #bioclipse
10:37 edrin joined #bioclipse
10:40 edrin hi
10:40 zarah oh hai edrin
10:40 egonw_ hi edrin
10:41 sneumann__ i.e. sed -e 's#git@github.com:egonw/bioclipse#git@github.com:bioclipse/#g' config
10:42 egonw_ sneumann__++
10:44 egonw sneumann++
10:51 sneumann you could push it even further ...
10:51 sneumann find . -type f | grep  .git/config | xargs sed -i -e 's#git@github.com:egonw/bioclipse#git@github.com:bioclipse/#g'
10:52 egonw yeah, and we'd want one with 'egonw' being a regexp too, so that olas, jonalv, and masak matches too
11:16 olass joined #bioclipse
11:34 jonalv joined #bioclipse
11:55 olass_ joined #bioclipse
11:55 olass_ left #bioclipse
12:53 olass joined #bioclipse
13:12 egonw olass: ping
13:13 egonw olass: do we have an example of making a scatter plot? using a manager?
13:28 egonw sneumann: you're last command is broken
13:43 egonw blah... considerable hacking involved in making a simple plot :(
13:46 sneumann egonw: yea,  the replacement should be bioclipse/bioclipse, I guess
13:46 egonw indeed
13:46 egonw that's what I did
13:49 egonw olass: ping
13:49 egonw olass: if you have a few minutes...
13:50 egonw could you please drop by?
14:09 jonalv egonw: have you not merged 2.4.x to master for cheminformatics?
14:10 egonw no, not yet
14:10 jonalv egonw: I thought we were to work from master in all repos now...
14:10 jonalv egonw: what have I missed?
14:10 egonw I just have not had time yet
14:11 jonalv apparanelty just checking out master in all repos and then running does not work...
14:11 egonw there are more important things right now
14:11 egonw for me
14:12 jonalv egonw: what about it takes so much time? Isn't it just a merge?
14:13 egonw no, there were merge conflicts
14:14 jonalv ah, too bad
15:19 egonw olass: you got a pull request for 2.4.x
15:19 olass DANKE
15:19 olass wops
15:19 olass danke
15:24 CIA-71 bioclipse.rdf: Egon Willighagen 2.4.x * r00c2ea2 / (2 files): Added a method to request all owl:sameAs resources - http://bit.ly/9xbwxF
15:24 CIA-71 bioclipse.rdf: Egon Willighagen 2.4.x * r760a81f / plugins/net.bioclipse.rdf/src/net/bi​oclipse/rdf/business/RDFManager.java : Strip language information, if the default English - http://bit.ly/aqi21k
15:25 egonw cool... the new repos is working fine :)
15:26 jonalv joined #bioclipse
15:30 samuell joined #bioclipse
15:30 egonw hi samuell
15:31 samuell hi egonw
15:33 egonw samuell: http://www.myexperiment.org/workflows/1475.html
15:33 zarah egonw's link is also http://tinyurl.com/3yoctd8
15:36 samuell Just checked ... looks nice
16:45 olass joined #bioclipse
17:22 egonw joined #bioclipse
17:41 egonw moin
17:41 zarah hello egonw, you fantastic person you
17:41 samuell moin
17:41 zarah hi samuell
17:42 samuell zarah isn't as impressed by me :/
17:42 samuell zarah: what's up?
17:42 zarah samuell: are you talking to *me*?
17:42 samuell zarah: yes
17:42 zarah samuell: I see.
17:44 samuell jee jee

| Channels | #bioclipse index | Today | | Search | Google Search | Plain-Text | summary