Camelia, the Perl 6 bug

IRC log for #bioclipse, 2010-09-17

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All times shown according to UTC.

Time Nick Message
05:05 egonw joined #bioclipse
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06:34 samuell left #bioclipse
06:53 zarah joined #bioclipse
06:53 egonw hi zarah
06:53 egonw zarah: do you like your new house?
06:53 zarah egonw: please rephrase or stop trying to be witty :)
06:53 egonw zarah: sorry that I took down your house by attemping in making a new window in the wrong wall :(
06:53 zarah egonw: eh... wha'?
06:54 egonw zarah: please have a look around, and see if you like the new bathroom
06:54 zarah egonw: I did not understand that
06:54 egonw zarah: that's the amnesia
06:54 zarah egonw: are you talking to *me*?
06:54 egonw @karma egonw
06:54 zarah egonw has a karma of 176
06:54 egonw zarah++
06:55 egonw @tell masak I installed all Perl modules, and only had to pull REST::Google::Search from CPAN, rest is all ubuntu packages
06:55 zarah Consider it noted.
06:56 egonw @tell Gpox please check out this bug report and comment if you see it possible to have a Copy/Paste architecture indepdent of SWT and Swing: https://sourceforge.net/tracker/?func=detail&amp​;atid=370024&aid=3067857&group_id=20024
06:56 zarah Consider it noted.
07:12 Gpox joined #bioclipse
07:22 egonw rebooting... new kernel... brb
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08:55 CIA-58 bioclipse.brunn: jonalv master * r5a0c44e / (6 files in 6 dirs): new version for update site - http://bit.ly/dgphr3
08:57 CIA-58 bioclipse.chembl: jonalv master * rac0c9f9 / (2 files in 2 dirs): fixed deps - http://bit.ly/beuE6s
08:58 jonalv hm I made that commit a couplke of days ago just forgot to push, sry annzi and egonw  and who else is using that repo..
10:09 samuell joined #bioclipse
10:15 egonw Gpox: ping
10:16 Gpox egonw: pong
10:16 zarah Gpox: You have new messages. Write '/msg zarah @messages' to read them.
10:16 egonw how do I add Zest to the target platform?
10:16 egonw just add it?
10:16 egonw it will then end up in the update site for the core platform?
10:18 Gpox add software site and then select the p2 site for zezt and check the zezt IU you want to include
10:55 samuell left #bioclipse
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11:22 egonw Gpox: mmm... Zest is already pulled in via download.eclipse.org/releases/galileo
11:22 egonw will do the Eclipse classpath dance once more, I guess
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13:11 egonw [15:10] <egonw> "Bioclipse is a sophisticated project that is open source and is focused with its algorithms on metabolism analysis and gene sequencing."
13:11 egonw [15:10] <egonw> hahaha
13:11 egonw [15:10] <egonw> and why don't the cite the bioclipse paper?
13:11 egonw http://www.biomedcentral.com/1471-2105/11/405
13:11 egonw sneumann: do you know those people?
13:12 egonw Philip Wenig and Juergen Odermatt
13:12 egonw EPL license, Eclipse based
13:12 egonw sneumann: I think you mentioned it...
13:13 masak oh, we're sophisticated? cool!
13:13 * masak dons a monocle and gets a glass of champagne
13:13 egonw masak: what about that second part?
13:13 egonw focusing on metabolism and gene sequencing
13:13 egonw I did not know that either
13:14 masak I think that sounds excellent, though.
13:14 egonw ok, the first we try, and perhaps with all the bits together, yes
13:14 masak wonder who is doing that particular focusing.
13:14 egonw but we focus on gene sequencing
13:14 egonw masak++
13:14 * masak feels a bit unfocused
13:14 masak :/
13:16 egonw they do cite the Bioclipse paper
13:19 olass joined #bioclipse
13:19 egonw olass: http://www.openchrom.net/ma​in/content/screenshots.php
13:20 olass yes, seen that
13:20 olass published a while ago
13:20 egonw I don't think I did :)
13:20 egonw yeah, july
13:20 jonalv "but they do have some restrictions regarding their interoperability and extensibility."
13:20 jonalv I wonder what they are refering to with that
13:20 olass they even used our icon of a spectrum!
13:20 egonw yeah, their quote on the CDK is akward too :)
13:21 olass well, they sited us
13:21 egonw cited too
13:21 olass a/s/c
13:21 egonw :)
13:21 olass sadsdasdas
13:21 olass *gah*
13:21 olass it's friday
13:21 egonw quote so... weeks fly by way too fast :(
13:22 olass egonw: is pele back online again?
13:22 olass mysql works?
13:23 olass egonw: bugs.bioclipse.net (i.e. http://pele.farmbio.uu.se/c​gi-bin/bugzilla/index.cgi) does not seem to work..
13:23 sneumann left #bioclipse
13:23 egonw no, mysql still does not work :(
13:23 jonalv zarah: buzilla is online?
13:23 zarah jonalv: I did not understand that
13:24 jonalv zarah: pelezilla is online?
13:24 zarah Not Found
13:24 olass egonw: are you making any progress in troubleshooting?
13:24 egonw olass: nope
13:24 olass damn
13:24 * olass wonders what happened
13:25 * olass misses buggzilla
13:33 * egonw too
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15:36 egonw samuell++
15:36 egonw (a preemptive ++ for the blog with bsl on bioclipse.smw :)
15:41 samuell :)
15:42 samuell (working on it :) )
15:56 * samuell has to run ... be back in 30-60 min
17:31 samuell Hmm... seems overloaded methods don't work well as manager methods ... :/
17:31 samuell (or, methods with multiple signatures, I mean ... )
17:32 samuell Ah, no, it was some other bug
17:43 jonalv left #bioclipse
17:43 samuell I suppose it should be possible for one method to call "itself", but with a different number of parameters?
17:43 samuell It does not seem to work, however.
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22:28 CIA-58 bioclipse.rdf: Samuel Lampa master * r1d48fac / plugins/net.bioclipse.rdf/src/net/bi​oclipse/rdf/business/JenaModel.java : New constructor, taking a Jena Model (not JenaModel) - http://bit.ly/8XCktC
22:28 CIA-58 bioclipse.rdf: Samuel Lampa master * ra3e287a / plugins/net.bioclipse.rdf/src/net/bi​oclipse/rdf/business/RDFManager.java : Made rdf.sparqlConstructRemote() properly return an IRDFStore - http://bit.ly/a63qp8
22:28 CIA-58 bioclipse.rdf: Samuel Lampa master * r8d3208b / plugins/net.bioclipse.rdf/src/net/bi​oclipse/rdf/business/JenaModel.java : Aesthetics - http://bit.ly/bBpHZ4
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