Camelia, the Perl 6 bug

IRC log for #bioclipse, 2010-10-26

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All times shown according to UTC.

Time Nick Message
00:32 Juul joined #bioclipse
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06:46 egonw moin
06:46 zarah hello egonw, you fantastic person you
06:55 Gpox joined #bioclipse
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08:11 CIA-67 bioclipse.core: Arvid Berg master * r3f9ea04 / features/net.bioclipse.platfo​rm_feature/buckminster.cspex : Added trailing slash to destination path - http://bit.ly/apqKTD
08:11 CIA-67 bioclipse.core: Arvid Berg master * r37b9bc8 / features/net.bioclipse.platf​orm_feature/build.properties : Added icons to bin.include - http://bit.ly/b5FlMv
08:29 olass Gpox++ //so looking forward to talking to you soon about all new cool build+package features!
08:38 egonw Gpox++
08:38 * egonw welcomes a presentation on the bioclipse buckminster stuff
08:38 egonw I am getting Hudson experience now in Cambridge, and would like to play with the Bioclipse-Buckminster-Hudson too
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12:22 CIA-67 bioclipse.bslrunner: jonalv master * ra014183 / (8 files in 5 dirs): created product and application - http://bit.ly/cQ4BGz
12:22 CIA-67 bioclipse.bslrunner: jonalv master * rf3f92b5 / plugins/net.bioclipse.bslrunner/plugin.xml : removed product property, and duplicate product - http://bit.ly/9dCWgd
12:22 CIA-67 bioclipse.bslrunner: jonalv master * r8dd1ef8 / (2 files): created buckminster files - http://bit.ly/9YJLJo
12:22 CIA-67 bioclipse.bslrunner: jonalv master * ra014183 / (8 files in 5 dirs): created product and application - http://bit.ly/cQ4BGz
12:22 CIA-67 bioclipse.bslrunner: jonalv master * rf3f92b5 / plugins/net.bioclipse.bslrunner/plugin.xml : removed product property, and duplicate product - http://bit.ly/9dCWgd
12:22 CIA-67 bioclipse.bslrunner: jonalv master * r8dd1ef8 / (2 files): created buckminster files - http://bit.ly/9YJLJo
12:24 egonw jonalv++
12:45 CIA-67 bioclipse.bslrunner: Arvid Berg master * rae7708a / (3 files in 2 dirs): Added buckminster create product action - http://bit.ly/aNSv1G
12:46 egonw http://pele.farmbio.uu.se/hudson/job/BSL.runner/
12:53 egonw too bad the simile time line does not seem to work properly
13:19 Gpox left #bioclipse
13:22 CIA-67 bioclipse.bslrunner: Arvid Berg master * r3c3296e / features/net.bioclipse.bslrunner​_feature/buckminster.properties : Disabled qualifier replacement - http://bit.ly/cbguh5
13:35 CIA-67 bioclipse.bslrunner: Arvid Berg master * r05b79a7 / features/net.bioclipse.bslrun​ner_feature/bslrunner.cquery : Removed targetplatform from resolution scope - http://bit.ly/alO5NQ
13:37 CIA-67 bioclipse.bslrunner: jonalv master * rfc351a0 / features/net.bioclipse.bslrun​ner_feature/bslrunner.product : added launcher name - http://bit.ly/cWlwfv
13:43 CIA-67 bioclipse.bslrunner: jonalv master * ra67efd1 / (2 files): try with setting version to 1.0.0 - http://bit.ly/b5DIIi
13:43 egonw jonalv: throwing in the big guns then?
13:44 jonalv egonw: I am close to giving up
13:44 jonalv egonw: I think I will have to leave it to gpo
13:44 egonw :)
13:44 jonalv gpox
13:44 jonalv oh that did it
13:44 jonalv I has a zip file
13:44 egonw jonalv++
13:44 jonalv gPox++
13:44 egonw @pz 3001
13:44 zarah http://pele.farmbio.uu.se/bug​zilla36/show_bug.cgi?id=3001
13:44 jonalv Gpox++
13:45 egonw @pz hudson
13:45 zarah [3001] hudson.bioclipse.net subdomain    http://tinyurl.com/3ycrot5
13:45 zarah Entire list at http://tinyurl.com/2vcqqbp
13:45 egonw yeah, it's blue
13:45 jonalv egonw: I wonder if we are allowed to do such a forwarding
13:45 egonw can you get it to build for 64 bit linux too?
13:46 egonw jonalv: what about bugs.bioclipse.net then?
13:46 jonalv egonw: I can't but gpox can
13:46 jonalv egonw: oh, I don't know...
13:46 jonalv egonw: but that is the same yea
13:46 jonalv egonw: oh hang on
13:46 jonalv I got a p2 update site it seems
13:47 jonalv egonw: nothing that I actually can run...
13:52 egonw how do you see that update site?
13:54 jonalv I have no idea
13:54 jonalv I jsut loked in the zip file...
13:54 egonw but how did you know you had a p2 update site then?
13:55 jonalv at least that is what I think the zip file contains
13:57 samuell joined #bioclipse
14:54 jonalv egonw: I am chaning some behaviors on some cdk methods in my headless branch
14:54 jonalv we will ahve to discuss that at soem time..
14:59 egonw oh o
15:00 jonalv basically: no more LogUtil calls from busniess plugins
15:00 jonalv LogUtils has become a ui thing
15:01 jonalv egonw: oh :(
15:01 jonalv egonw: INchimanager is a dep fro cdk mangaer
15:01 jonalv and I thoguht I was sort of doneish
15:01 jonalv not een close...
15:03 egonw LogUtil??
15:03 egonw what's that?
15:03 egonw Bioclipse had Logger, right?
15:03 egonw oh, and check this code: http://gist.github.com/647057
15:03 jonalv egonw: it's the class doing strange things like hadnling exceptions
15:04 egonw oh, ic...
15:04 jonalv popping up stack trace dialgos and so
15:04 egonw year, tear that apart if you like... that's not my code :)
15:04 jonalv but it aslo does some othe logg related things
15:04 jonalv maybe we should seperate those...
15:04 egonw yeah, perhaps methods should have logging tool callback classes as parameter
15:04 egonw just like ProgressMonitor...
15:05 jonalv I don't know I am just doing as little as possible that might work for the moment
15:05 jonalv egonw: so what is this I am loking at?
15:05 jonalv some sort of tests
15:05 egonw unit testing, TNG
15:05 jonalv @Givne looks intresting
15:05 egonw it's JExample: http://chem-bla-ics.blogspot.com/2010/08/s​pecifying-unit-test-dependencies-with.html
15:05 zarah egonw's link is also http://tinyurl.com/38smwq3
15:06 jonalv but why?
15:06 egonw but then with multiple unit test inheritance :)
15:06 egonw performance
15:06 jonalv Can't you just call the method in the begining of the test?
15:06 egonw tests become more unit, and you do not have to redo certain computation
15:07 jonalv oh hang on so it does not redo the test in @Given but only runs the test if the given test passes?
15:07 jonalv nice
15:07 jonalv I think I have done something similar
15:07 egonw indeed
15:08 jonalv but maybe not after all
15:08 jonalv that was rerunnign otehr test methods
15:08 jonalv more because I wanted the side effects of those methods nad because I wanted them to fail if the other one failed...
15:09 egonw you get reported about the number of tests not run because something more deep inside failed
15:09 egonw this is actually pretty useful, because the fails you do get reported
15:10 egonw are causing other tests to fail too, and making it easier to pinpoint the source of problems
15:10 jonalv sounds very nice
15:13 samuell Have tried to clean up some spam on bioclipse.net now, and installed the mollom spam protection module ... so hoping that things will improve ...
15:14 jonalv samuell++
15:14 samuell But feel free to report if I missed somthing ... there might be more "smithål" to "täcka upp"
15:14 samuell (sorry for my swenglish :) )
15:15 egonw samuell: can you check about making me and jonalv admins or so, or at least to have right to delete posts
15:15 egonw or mark them as spam
15:15 egonw or so
15:15 samuell Yeah, sure
15:15 egonw to share the burden of clean up, while making it dissappear faster?
15:15 masak sv:"täcka upp" = en:"cover"
15:15 samuell Thought you were already ...
15:16 egonw could not find a way to remove it...
15:16 samuell Will check that
15:16 masak I'm not familiar with the word sv:"smithål"
15:16 egonw tack
15:16 masak "loophole"?
15:27 * jonalv needs a faster computer takes forever to rebuild bioclipse for every one line change he does
15:35 jonalv why do we have a zillion of repos? I am going to go crazy when creating a branches and commiting this refactoring pass of mine...
16:10 Juul left #bioclipse
16:42 CIA-67 bioclipse.balloon: jonalv HEADLESS * rea9d4dd / (7 files in 3 dirs): refarctoring for HEADLESS - http://bit.ly/9yKbTD
16:44 CIA-67 bioclipse.bioinformatics: jonalv HEADLESS * r3d369d7 / (38 files in 22 dirs): refarctoring for HEADLESS - http://bit.ly/ahrBRQ
16:45 olass joined #bioclipse
16:49 CIA-67 bioclipse.cheminformatics: jonalv HEADLESS * r12a866d / (9 files in 7 dirs): removed further ui deps - http://bit.ly/chc2Fy
16:49 CIA-67 bioclipse.cheminformatics: jonalv HEADLESS * ra1e0978 / (137 files in 82 dirs): refarctoring for HEADLESS - http://bit.ly/9BW7bd
16:52 CIA-67 bioclipse.ds: jonalv HEADLESS * r88e9e62 / (41 files in 26 dirs): refarctoring for HEADLESS - http://bit.ly/9QHn6f
16:53 CIA-67 bioclipse.joelib: jonalv HEADLESS * r080574f / (5 files in 4 dirs): refarctoring for HEADLESS - http://bit.ly/a1uBqZ
16:56 CIA-67 bioclipse.moss: jonalv HEADLESS * rccec172 / (11 files in 8 dirs): refarctoring for HEADLESS - http://bit.ly/bOR5Dq
16:56 CIA-67 bioclipse.qsar: jonalv HEADLESS * r3550553 / (29 files in 20 dirs): refarctoring for HEADLESS - http://bit.ly/ctKj55
16:57 CIA-67 bioclipse.rdf: jonalv HEADLESS * r7e3c8f2 / (23 files in 17 dirs): refarctoring for HEADLESS - http://bit.ly/dy23cc
16:58 CIA-67 bioclipse.social: jonalv HEADLESS * rd0c1214 / (15 files in 8 dirs): refarctoring for HEADLESS - http://bit.ly/9wRtRo
16:58 CIA-67 bioclipse.statistics: jonalv HEADLESS * r4bf48b6 / (5 files in 3 dirs): refarctoring for HEADLESS - http://bit.ly/cIFfFH
16:59 CIA-67 bioclipse.structuredb: jonalv HEADLESS * r71780c4 / (20 files in 10 dirs): refarctoring for HEADLESS - http://bit.ly/bnSDCL
17:00 CIA-67 bioclipse.vscreen: jonalv HEADLESS * r0730140 / (18 files in 6 dirs): refarctoring for HEADLESS - http://bit.ly/amps2m
17:02 jonalv okey feels nice to have dumped that somewhere else than my harddrive, no I can have my computer stolen and not worry _soo_ much
17:03 jonalv would still be worried though...
17:03 jonalv :)
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