Camelia, the Perl 6 bug

IRC log for #bioclipse, 2011-02-13

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All times shown according to UTC.

Time Nick Message
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07:28 CIA-91 bioclipse.cheminformatics: Egon Willighagen master * r32d4c99 / features/net.bioclipse.chemoin​formatics_feature/feature.xml : The CDK inchi module is now providing standard InChIs - http://bit.ly/fXTEde
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09:35 CIA-91 bioclipse.cheminformatics: Egon Willighagen master * rd0ee9c6 / (2 files in 2 dirs): Ignoring some tests, pending a fix for loading from /testFiles - http://bit.ly/eLSHfJ
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09:46 CIA-91 bioclipse.cheminformatics: Egon Willighagen master * r2962c16 / plugins/net.bioclipse.chemoinfor​matics.test/META-INF/MANIFEST.MF : Tests depend on CML too - http://bit.ly/gi5JIw
09:57 CIA-91 bioclipse.cheminformatics: Egon Willighagen master * r4e82327 / plugins/net.bioclipse.cdk.business/src/ne​t/bioclipse/cdk/business/CDKManager.java : Hardcoded creating a MDL V2000 writer - http://bit.ly/hvrcu3
10:11 CIA-91 bioclipse.cheminformatics: Egon Willighagen master * r0a6d565 / plugins/net.bioclipse.cdk.business.te​st/src/net/bioclipse/cdk/business/tes​t/AbstractCDKManagerPluginTest.java : Whitespace is now removed, but I think that's acceptable - http://bit.ly/hLXgYr
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10:24 CIA-91 bioclipse.cheminformatics: Egon Willighagen master * rcc35c89 / plugins/net.bioclipse.cdk.business.te​st/src/net/bioclipse/cdk/business/tes​t/AbstractCDKManagerPluginTest.java : Ignoring some tests, pending a fix for loading from /testFiles - http://bit.ly/eTRIqM
10:24 CIA-91 bioclipse.cheminformatics: Egon Willighagen master * r14472c4 / plugins/net.bioclipse.inchi.business.te​st/src/net/bioclipse/inchi/business/tes​t/AbstractInChIManagerPluginTest.java : Ignoring some tests, pending a fix for loading the InChI library on Hudson - http://bit.ly/fO39rs
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10:30 egonw ah, a genuine bug :)
10:31 * egonw is 'fixing' the cheminformatics.test bit on Hudson
10:34 jonalv sounds good
10:40 CIA-91 bioclipse.cheminformatics: Egon Willighagen master * r103b33a / plugins/net.bioclipse.inchi.business.te​st/src/net/bioclipse/inchi/business/tes​t/AbstractInChIManagerPluginTest.java : Manager initialization test - http://bit.ly/ff4rBL
10:40 CIA-91 bioclipse.cheminformatics: Egon Willighagen master * r3cd4cd4 / plugins/net.bioclipse.cdk.business/src/ne​t/bioclipse/cdk/business/CDKManager.java : Bioclipse does not support MDL Query files yet - http://bit.ly/dKadMm
10:40 CIA-91 bioclipse.cheminformatics: Egon Willighagen master * r81a075e / plugins/net.bioclipse.cdk.business/src/ne​t/bioclipse/cdk/business/CDKManager.java : Report which writer does not support those IChemObjects - http://bit.ly/gY8sT9
10:40 egonw see: http://pele.farmbio.uu.se/hudson/jo​b/Bioclipse.test.chemoinformatics/
10:41 egonw it does involve marking tests as @Ignore (with a matching pelezilla report)
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10:54 egonw mmm...
10:54 egonw no failing unit tests, but still red ... ??
10:55 egonw ah... org.eclipse.buckminster.core.met​adata.MissingComponentException: No component named net.bioclipse.cheminformatics.tests_feature is known to Buckminster
10:55 egonw almost there...
11:03 CIA-91 bioclipse.cheminformatics: Egon Willighagen master * r30cabd4 / (4 files): Added an update site for the test feature - http://bit.ly/f4NG1G
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11:39 egonw hi olass
11:39 olass hi egonw
11:57 CIA-91 bioclipse.cheminformatics: Egon Willighagen master * r4371f8b / features/net.bioclipse.cheminfor​matics.test_feature/feature.xml : Also depend on the Bioclipse core - http://bit.ly/iclK4y
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12:14 egonw olass: btw, did you see my blog post of today?
12:15 egonw costed me my saturday, but was too ill to do anything useful
12:28 olass good job
12:30 olass great to have an updated cdk in bioclipse
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21:16 olass hi edrin
21:16 olass what's up?
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