Camelia, the Perl 6 bug

IRC log for #bioclipse, 2011-03-20

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All times shown according to UTC.

Time Nick Message
06:24 egonw joined #bioclipse
08:16 sneumann joined #bioclipse
08:29 sneumann left #bioclipse
11:58 cande joined #bioclipse
11:58 cande ping egonw
12:02 jonalv joined #bioclipse
12:03 egonw cande: pong
12:03 egonw hi jonalv
12:03 cande hey
12:04 cande im about to moverj.servi.rcpdemo code
12:05 cande which project should i put the code in?  net.bioclipse.r ?
12:05 cande or the r.manager?
12:05 cande (net.bioclipse.r.business)
12:08 egonw dunno... both sound OK to me
12:08 egonw it doesn't have UI code, right?
12:09 cande no
12:09 cande i put it in net.bioclipse.r :)
12:10 egonw ok
12:10 egonw if it turns out wrong, we just move it again
12:10 cande yes :)
12:22 cande general question
12:22 cande in java, do you need to import a class, if that class is in the same package?
12:23 egonw you never have to import class from the same package
12:23 egonw neither from java.lang
12:24 cande ok! :)
12:33 cande what does public synchronized means?
12:36 egonw has to do with threading
12:36 egonw there is a book on that in Jonathan/Arvid's room...
12:36 egonw and material online
12:52 egonw left #bioclipse
13:23 jonalv cande: working today? :)
13:23 zarah jonalv: You have new messages. Write '/msg zarah @messages' to read them.
13:24 jonalv zarah: just tell me...
13:24 zarah jonalv: 1 d 18 h 51 m 4 s ago, egonw said http://www.bio4j.com/
13:35 cande jonalv: ja :)
13:48 CIA-91 bioclipse.statistics: Christian Ander R_console * rc6035b1 / (14 files in 3 dirs): Removal of REngine and cleanup - http://bit.ly/hP7leX
13:48 CIA-91 bioclipse.statistics: Christian Ander R_console * rc67501a / (5 files in 3 dirs): RServi manager in R plugin - http://bit.ly/hHhJ1H
13:48 CIA-91 bioclipse.statistics: Christian Ander R_console * r23a9e30 / plugins/net.bioclipse.r.business/src/net/b​ioclipse/r/business/RBusinessManager.java : R business Rengine removal - http://bit.ly/eW86AJ
13:48 CIA-91 bioclipse.statistics: Christian Ander R_console * rc6c0077 / plugins/net.bioclipse.r.ui/src/net/bi​oclipse/r/ui/views/RConsoleView.java : Update Rui with RServi - http://bit.ly/gbgPgZ
15:30 egonw joined #bioclipse
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18:43 Sonya joined #bioclipse
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21:00 egonw hi Sonya
21:01 egonw got the Jmol.jar vecmath bug report
21:01 egonw and the jar
21:01 egonw Sonya: can I use "Sonya Alexandrova <theonlymonka@gmail.com>" as author info to create a commit for that jar?
21:01 Sonya hi Egon
21:01 Sonya yes, sure
21:02 Sonya thank you
21:02 egonw ok, will combine that with the patch for the MANIFEST.MF
21:02 Sonya I hope it's all right :) it's the first patch I made
21:03 egonw yeah, I'll have to give some git lessons, I think :)
21:03 egonw google for 'git format-patch'
21:03 zarah egonw: http://www.kernel.org/pub/software/​scm/git/docs/git-format-patch.html
21:03 egonw zarah: obrigad!
21:03 zarah egonw: I did not understand that
21:04 Sonya well, at first I wanted to do a git patch, but then Eugene told me that his git-format patch didn't work :) I'll try anyway, okay
21:04 egonw I tend to have issues with whitespace...
21:05 egonw so when I now apply, I often use the -3 --ignore-whitespace options
21:05 egonw did Eugene use those?
21:06 Sonya I don't know... I'll ask him
21:07 egonw Sonya: you created this jar from the previous jar? that is, it's the same version, right?
21:08 Sonya yes, I just removed the vecmath classes
21:09 egonw got a prefered commit message?
21:10 egonw or is "Removed javax.vecmath from Jmol.jar" OK?
21:11 Sonya ok
21:21 CIA-91 bioclipse.cheminformatics: Egon Willighagen master * rb2c98e0 / plugins/net.bioclipse.opsin/META-INF/MANIFEST.MF : Import log4j - http://bit.ly/eFl2Oj
21:21 CIA-91 bioclipse.cheminformatics: Sonya Alexandrova master * r3b8028a / (2 files in 2 dirs): Removed javax.vecmath from Jmol.jar - http://bit.ly/fE3iYP
21:22 CIA-91 bioclipse.cheminformatics: Egon Willighagen master * r75d60ac / plugins/net.bioclipse.opsin.ui/src/net/bioclip​se/opsin/ui/wizards/IUPACInputWizardPage.java : Fixed field title - http://bit.ly/fG11jg
21:22 CIA-91 bioclipse.cheminformatics: Egon Willighagen master * r1f3db4c / (2 files in 2 dirs): Fixed jar name, solving the class not found exception - http://bit.ly/eTec5g
21:39 sneumann left #bioclipse
21:57 CIA-91 bioclipse.social: Egon Willighagen master * rca5ad1d / features/net.bioclipse.social_feature/feature.xml : Raised the required version to of .core and .rdf to 2.5.0 - http://bit.ly/fXKfpB
21:59 jonalv left #bioclipse
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