Camelia, the Perl 6 bug

IRC log for #bioclipse, 2011-07-20

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All times shown according to UTC.

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07:33 Gpox only hivdrc that don't compile http://pele.farmbio.uu.se/jenkins/view/Bioclipse/
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12:19 egonw is there an urgency for me to try Bioclipse-R right now?
12:19 egonw e.g. would that mean it could be part of 2.6?
12:20 egonw Gpox: is tehre a new ETA for 2.6?
12:20 cande Bioclipse-R should be beta testet for Mac
12:20 cande next week windows will be ready for beta testing
12:21 cande about linux i'm note sure if it will be ready till 1:st of august
12:21 egonw ok, then please merge into the 2.6 branch?
12:23 cande yes,, let me check with gpox
12:28 Gpox egonw: 2.5 will most likly be released this week
12:31 jonalv Gpox++
12:31 egonw Gpox: how many 2.5.x released do you anticipate?
12:31 egonw releaseS
12:34 Gpox they are continius, the market place is missing. I will start looking at the old bugs to start filtering them
12:35 Gpox and 2.6 comes when we need it, like a marketing version
12:38 egonw ok, understood
12:38 CIA-120 bioclipse.statistics: Christian Ander R_console * racbbd3b / plugins/net.bioclipse.r.business/src/net/b​ioclipse/r/business/RBusinessManager.java :
12:38 CIA-120 bioclipse.statistics: Get system-command return message, check rj version and reinstall correct
12:38 CIA-120 bioclipse.statistics: version, fixed windows system-commands (not tested yet) -
12:38 CIA-120 bioclipse.statistics: https://github.com/bioclipse/bioclipse.statistics​/commit/acbbd3bc2f571dbb807118a8d050db6afd66e6ef
12:38 cande Now, the r-console is stable for mac
12:38 Gpox I wonder if Bioclipse runs on OS X Lion
12:38 egonw cande: so, you use the branch to group patches?
12:39 egonw Gpox: hahaha...
12:39 egonw Gpox: that's evil :)
12:39 egonw has someone tried Debian GNU/FreeBSD yet?
12:39 cande egonw: don't know what you are talking about
12:40 egonw well, it R stuff is part of master now, why are you committing to the R_console branch?
12:40 Gpox well it was just released, so new macs will have it from now on
12:40 Gpox well it was actualy a merge master -> R_console
12:41 egonw ouch
12:41 Gpox only one commit that changed the version to 2.5.0
12:41 egonw :)
12:41 * egonw has bad experiences with merging branches between branches
12:43 Gpox It was no problem
12:43 Gpox should I commit it?
12:45 egonw no, with just one patch, it's likely fine... when merging back into master, with more patches, git can get confused
12:45 egonw that we had with the CDK at some point
12:45 egonw I suggest to merge R_Console into master now...
12:45 jonalv egonw: are you sure it actually was git that was confused?
12:45 egonw and continue stabilization there
12:45 egonw because git complained :)
12:45 egonw git users always complain
12:48 CIA-120 bioclipse.statistics: Arvid Berg master * r19bd946 / (34 files in 14 dirs): Merge branch 'R_console' (+44 more commits...) - https://github.com/bioclipse/bioclipse.statistics​/commit/19bd946f09cee2511aebfdb976f903aa24d71919
12:48 Gpox there pleas use master for continuing development of the R feature
12:49 egonw cande: got that?
12:51 cande ok!!!
12:51 cande will do
12:51 Gpox actualy there is no reason to keep the R_console branch is there
12:51 cande true
12:51 jonalv probably not if you are not going to be using it
12:51 cande will the adress to the p2 site change now?
12:52 Gpox yes
12:52 cande ok
12:53 cande Gpox: how do we add Bioclise-R as an default updatesite in Bioclipse?
12:56 Gpox new p2 site http://pele.farmbio.uu.se/jenkins/view/Bioclip​se/job/Bioclipse.statistics/lastSuccessfulBuil​d/artifact/buckminster.output/net.bioclipse.st​atistics_site_1.0.0-eclipse.feature/site.p2/
12:56 zarah Gpox's link is also http://tinyurl.com/3ld3kq3
12:57 Gpox it will be included with the rest in an aggregated updatesite
12:57 jonalv Gpox: when do you expect to have that aggreggated update site up and running?
12:57 egonw cande: so, mac and win are stable now?
12:58 * egonw is booting his bioclipse dev center
13:19 Gpox egonw: does bioclipse.hivdrc compile for you?
13:22 cande egonw: mac is stable, win will be next week
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14:51 CIA-120 bioclipse.core: Arvid Berg master * rcee9359 / net.bioclipse.target.platf​orm/target-platform.target : Readded zest to target platform - https://github.com/bioclipse/bioclipse.core/co​mmit/cee935968d32708e45ca3545bae56ac20ef74995
14:56 CIA-120 bioclipse.core: Arvid Berg master * rea4f1da / net.bioclipse.target.platf​orm/target-platform.target :
14:56 CIA-120 bioclipse.core: Changed walware site
14:56 CIA-120 bioclipse.core: now using statistics p2 site - https://github.com/bioclipse/bioclipse.core/co​mmit/ea4f1daf100e9f21e7fb2a441b7b7a19d21d89db
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