Camelia, the Perl 6 bug

IRC log for #bioclipse, 2011-08-01

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All times shown according to UTC.

Time Nick Message
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09:45 CIA-120 bioclipse.ds: Ola Spjuth master * rb4ccf08 / plugins/net.bioclipse.ds.r.epafhm/plugin.xml : Added new parameters for dense EP (+5 more commits...) - https://github.com/bioclipse/bioclipse.ds/com​mit/b4ccf084d4ce897aa3c8855b35431da26a68bd88
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12:02 CIA-120 bioclipse.statistics: Christian Ander master * r1852d1f / plugins/net.bioclipse.r.business/src/net/b​ioclipse/r/business/RBusinessManager.java : Fix for Windows setwd(..) - https://github.com/bioclipse/bioclipse.statistics​/commit/1852d1f81c60883d5a4b0e18ff9063a46afad3e5
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12:29 CIA-120 bioclipse.statistics: Christian Ander master * rf198183 / plugins/net.bioclipse.r.business/src/net/b​ioclipse/r/business/RBusinessManager.java : Using system dependent fileseparator. - https://github.com/bioclipse/bioclipse.statistics​/commit/f198183b6bf146734b95cbac3a5d3f4de6ef0d72
12:42 CIA-120 bioclipse.statistics: Christian Ander master * r7dab48c / plugins/net.bioclipse.r.business/src/net/b​ioclipse/r/business/RBusinessManager.java : Changed default plottingdevice to x11 on Mac - https://github.com/bioclipse/bioclipse.statistics​/commit/7dab48cca925bdd65ca34ab1276e98ad47acad74
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14:31 zaetnick gpox: ping
14:31 Gpox zaetnick: pong
14:32 zaetnick gpox: the installation of R_console from the update site fails on XP
14:32 Gpox got any logs?
14:32 zaetnick do you want the error message here or on gist, it's not so long
14:33 Gpox all of it would be good
14:33 zaetnick second
14:38 zaetnick gpox: https://gist.github.com/1118250
14:40 zaetnick plotting works on Mac OS 10.6 32 bit
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14:51 zaetnick gpox: here is the .log fom the workspace
14:51 zaetnick https://gist.github.com/1118273
14:54 Gpox as the error message indicates the undersoce should probaly not be there
14:54 Gpox where dose the file comes from? the walware plugins?
14:57 zaetnick is the
14:59 zaetnick well, I had problem unzipping these org.eclipse.equinox...
15:01 Gpox so it might be from eclipse
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15:09 Gpox zaetnick: http://www.kelvinluck.com/2009/08/error​-installing-plugins-in-eclipse-on-osx/
15:09 zarah Gpox's link is also http://tinyurl.com/3ezs8ka
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15:21 CIA-120 bioclipse.ds: Ola Spjuth master * rb160684 / plugins/net.bioclipse.ds.r/src/net​/bioclipse/ds/r/RModelMatcher.java : Added stub for reading dimension of R datasets - https://github.com/bioclipse/bioclipse.ds/com​mit/b16068406f3fe4088434d3bf8200d5eb76bd7a77
15:21 CIA-120 bioclipse.ds: Ola Spjuth master * rcd92f10 / (4 files in 3 dirs): Implemented reading of QSAR descriptors for predicitons in DS - https://github.com/bioclipse/bioclipse.ds/com​mit/cd92f102d4e0677ea7399669d693053172a20ead
15:21 CIA-120 bioclipse.ds: Ola Spjuth master * r4844e07 / (3 files in 3 dirs): Made variable dim an explicit parameter instead if implicit from Rmodel - https://github.com/bioclipse/bioclipse.ds/com​mit/4844e07dedc60f706740c266816c3e72f6defd54
15:21 CIA-120 bioclipse.ds: Ola Spjuth master * r516f1d6 / plugins/net.bioclipse.ds.ui/c​heatsheets/gettingstarted.xml : Fixed cheat sheet after move to ds.ui plugin. - https://github.com/bioclipse/bioclipse.ds/com​mit/516f1d6840feba6fab9f6b3aacc4461921d7d698
15:21 CIA-120 bioclipse.ds: Ola Spjuth master * reb0676d / (4 files in 3 dirs):
15:21 CIA-120 bioclipse.ds: Added QSAR dep to u251 and ds.r
15:21 CIA-120 bioclipse.ds: * Added option "require3d"
15:21 CIA-120 bioclipse.ds: * Started implementing cdk desc ds predictions - https://github.com/bioclipse/bioclipse.ds/com​mit/eb0676d5c7d1c82b22e5ac7be6bd99a04a965997
15:27 CIA-120 bioclipse: Samuel Lampa master * ra69c721 / plugins/net.bioclipse.uppmax/src/net/bioclips​e/hpc/domains/application/HPCApplication.java : More general command to run on the server side - https://github.com/bioclipse/bioclipse.hpc/co​mmit/a69c72123bd037944ce825bbcc0a141afb1f81ba
15:28 zaetnick gpox: thanks for the link, solved it
15:28 zaetnick it remains now to figure out why R is not working :)
15:34 CIA-120 bioclipse: Samuel Lampa master * re7d70b7 / (117 files in 30 dirs): Fixing some remnants of old repo name - https://github.com/bioclipse/bioclipse.hpc/co​mmit/e7d70b78707519cbf829014c1f90b2e83c1bb7dc
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18:04 CIA-120 bioclipse: Samuel Lampa master * r9fbb027 / plugins/net.bioclipse.hpc/src/net/bioclipse/​hpc/domains/application/HPCApplication.java : Stub for getting user info from the FIMS Proxy - https://github.com/bioclipse/bioclipse.hpc/co​mmit/9fbb027f0137dc758a0433cea085fdf4ed239551
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18:41 CIA-120 bioclipse: Samuel Lampa master * rac8c8b5 / (3 files in 2 dirs): getUserInfo now works for username. Added Manager method also (works) (+5 more commits...) - https://github.com/bioclipse/bioclipse.hpc/co​mmit/ac8c8b5b8b06e972c28118df949c702cf7a076fe
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