| Time |
Nick |
Message |
| 06:18 |
|
olass joined #bioclipse |
| 06:25 |
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egonw joined #bioclipse |
| 06:39 |
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zaetnick joined #bioclipse |
| 07:32 |
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| 07:40 |
CIA-98 |
bioclipse.balloon: Arvid Berg 2.5.x * r3927032 / (3 files in 3 dirs): |
| 07:40 |
CIA-98 |
bioclipse.balloon: Removed qualifier and added platform filter |
| 07:40 |
CIA-98 |
bioclipse.balloon: Because of a possible bug in buckminster related |
| 07:40 |
CIA-98 |
bioclipse.balloon: to qualifier on fragments - http://git.io/2ew53g |
| 07:40 |
CIA-98 |
bioclipse.balloon: Arvid Berg 2.5.x * r920dee9 / features/net.bioclipse.balloon_feature/feature.xml : Updated supported envrionment and required dependencies - http://git.io/GBtziQ |
| 07:43 |
CIA-98 |
bioclipse.core: Arvid Berg 2.5.x * r1bfab5e / features/net.bioclipse.core.tests_feature/AllCoreRepoPluginTestsSuit.launch : Modified test launcher to use features - http://git.io/1dtGag |
| 07:58 |
CIA-98 |
bioclipse.core: Arvid Berg 2.5.x * ra45ce1e / features/net.bioclipse.core.tests_feature/feature.xml : Added platform feature to resolve core stuff in test run - http://git.io/HBTisg |
| 08:25 |
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olass joined #bioclipse |
| 08:27 |
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| 08:41 |
CIA-98 |
bioclipse.bridgedb: Egon Willighagen master * r56245bc / (2 files): Allow mapping with local databases too - http://git.io/qFASig |
| 08:41 |
CIA-98 |
bioclipse.bridgedb: Egon Willighagen master * ra904095 / (2 files): Allow the creation of Xref objects from search output - http://git.io/11vqIg |
| 08:41 |
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egonw joined #bioclipse |
| 08:48 |
CIA-98 |
bioclipse.core: Arvid Berg 2.5.x * r0fff8d8 / plugins/net.bioclipse.logback/src/logback.xml : Changed from layout to encoder in log back config file - http://git.io/JtmRpg |
| 08:49 |
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| 11:01 |
jonalv |
Gpox: c12c3c4c5c1c1c6c7c2c2c8c3c3c9c4c4c%10c5c5c1c1c6c6c%11c7c2c2c7c8c3c3c8c9c4c4c9c%10c5c5c1c1c6c6c%11c2c2c7c3c3c8c4c4c9c5c1c1c6c2c3c41 |
| 11:26 |
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sneumann joined #bioclipse |
| 12:29 |
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ilogger2 joined #bioclipse |
| 12:36 |
egonw |
nice SMILES |
| 12:37 |
CIA-98 |
bioclipse.cheminformatics: Arvid Berg 2.5.x * r831e683 / plugins/net.bioclipse.cdk.ui/src/net/bioclipse/cdk/ui/wizards/NewFromSMILESWizard.java : |
| 12:37 |
CIA-98 |
bioclipse.cheminformatics: Added progress monitor and handle fixAromaticBondORder timeout. |
| 12:37 |
CIA-98 |
bioclipse.cheminformatics: fix for bug 3067 - http://git.io/akoBQA |
| 12:37 |
CIA-98 |
bioclipse.cheminformatics: Arvid Berg 2.5.x * rb4aeb86 / plugins/net.bioclipse.cdk.jchempaint/src/net/bioclipse/cdk/jchempaint/editor/JChemPaintEditor.java : |
| 12:37 |
CIA-98 |
bioclipse.cheminformatics: Force virtual to become visible when savingAs for molecule |
| 12:37 |
CIA-98 |
bioclipse.cheminformatics: Solves bug 3016 - http://git.io/EfNNiQ |
| 12:37 |
zarah |
bug #3067 | http://tinyurl.com/7q3223h |
| 12:37 |
zarah |
bug #3016 | http://tinyurl.com/6vw8ors |
| 12:53 |
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zaetnick joined #bioclipse |
| 13:21 |
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| 13:30 |
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| 13:34 |
CIA-98 |
bioclipse.core: Arvid Berg 2.5.x * r603bf0b / (2 files): |
| 13:34 |
CIA-98 |
bioclipse.core: Moved ContentTypesPluginTest to net.bioclipse.cml.tests |
| 13:34 |
CIA-98 |
bioclipse.core: That is where the cml contentypes is declared. - http://git.io/N4_y5Q |
| 13:34 |
CIA-98 |
bioclipse.core: Arvid Berg 2.5.x * rc65e0dd / plugins/net.bioclipse.scripting.tests/src/net/bioclipse/scripting/ScriptingTestCase.java : Fixed javascript test - http://git.io/cGW9GA |
| 13:47 |
CIA-98 |
bioclipse.cheminformatics: Arvid Berg 2.5.x * r784f3f7 / features/net.bioclipse.chemoinformatics_feature/feature.xml : Added cmlxom to required deps - http://git.io/k84ojw |
| 13:47 |
CIA-98 |
bioclipse.cheminformatics: Arvid Berg 2.5.x * re52b907 / plugins/net.bioclipse.cdk.ui/src/net/bioclipse/cdk/ui/wizards/NewFromSMILESWizard.java : Removed unused import added my mistake - http://git.io/D7Ci7w |
| 13:56 |
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| 14:01 |
CIA-98 |
bioclipse.core: Arvid Berg 2.5.x * r9d74a44 / plugins/net.bioclipse.scripting.tests/src/net/bioclipse/scripting/ScriptingTestCase.java : |
| 14:01 |
CIA-98 |
bioclipse.core: Fixed test case to work both locally and on pele |
| 14:01 |
CIA-98 |
bioclipse.core: This is because the javascript implementations differs |
| 14:01 |
CIA-98 |
bioclipse.core: between the machines - http://git.io/r_wVrQ |
| 14:02 |
egonw |
that sounds scary |
| 14:02 |
egonw |
I think we shiped Rhino with Bioclipse? |
| 14:06 |
jonalv |
egonw: no seems different JVMs have different JavaScript |
| 14:06 |
egonw |
ok, that answer does not make sense |
| 14:06 |
egonw |
[02/16/12 15:02] <egonw> I think we shiped Rhino with Bioclipse? |
| 14:06 |
egonw |
yes or no? |
| 14:06 |
jonalv |
egonw: on Ubuntu it's open java or something? |
| 14:06 |
jonalv |
egonw: no |
| 14:07 |
egonw |
ah, ok, yes, that is asking for problems |
| 14:07 |
jonalv |
aren't we using the one shipped with the JVM, remember java scripting support and stuff? |
| 14:07 |
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| 14:07 |
jonalv |
egonw: that is why it was so easy to add that other scripting console you were working on, no? |
| 14:08 |
egonw |
good point |
| 14:08 |
egonw |
yeah, that could have been the time we dropped our custom rhino |
| 14:18 |
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| 18:34 |
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zaetnick joined #bioclipse |
| 19:00 |
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egonw joined #bioclipse |
| 19:53 |
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| 21:21 |
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| 22:04 |
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| 23:23 |
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