Camelia, the Perl 6 bug

IRC log for #bioclipse, 2012-05-15

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All times shown according to UTC.

Time Nick Message
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09:05 CIA-46 bioclipse.statistics: Valentin Georgiev 2.5.x * r69c35a0 / (2 files in 2 dirs): Improve the R version checking - http://git.io/zxiEMw
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12:17 andra hi olass. I made the promised the pubmed plugin. Since it has been on your todo list for while, could you elaborate a bit on which functionality you would have implemented?
12:17 olass andra: sure!
12:18 olass could you please send me an email to remind me?
12:19 olass andra++
12:19 olass karma andra
12:19 zarah andra has a karma of 2
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12:38 andra the source code of the pubmed plugin code can be found here: https://github.com/andrawaag/net.bioclipse.pubmed
12:51 egonw andra++
12:51 egonw and Hudson's results: http://pele.farmbio.uu.se/jenk​ins/job/bioclipse.textmining/
12:52 egonw Gpox: ah, you got the OpenTox_QSAR_DS release working... what did I do wrong?
12:56 egonw jonalv++ (for making me aware of the cause why some exceptions were not properly reported in the JS console...)
12:58 * egonw is adding a lot of "throws BioclipseException" to IOpenToxManager.java
13:02 CIA-46 bioclipse.ds: Ola Spjuth 2.5.x * r4cb09a7 / (4 files): Added models_site containing cpdb, ahr, and ames model plugins - http://git.io/vhaecQ
13:10 CIA-46 bioclipse.ds: Ola Spjuth 2.5.x * r0d306bf / features/net.bioclipse.ds_feature/feature.xml : Added models_site to ds_feature for now - http://git.io/UkYqrw
13:12 CIA-46 bioclipse.opentox: Egon Willighagen master * rb01a4f1 / plugins/net.bioclipse.opentox/src/net/biocl​ipse/opentox/business/IOpentoxManager.java : Renamed variable to be clear that the String is a URI for an ontology server - http://git.io/IZxPAg
13:12 CIA-46 bioclipse.opentox: Egon Willighagen master * rd97eada / (6 files in 3 dirs): Added a plugin to register a locally hosted ambit2/,ontology/ installation - http://git.io/6AVfwA
13:12 CIA-46 bioclipse.opentox: Egon Willighagen master * re858548 / (14 files in 8 dirs): Factored out OpenTox server configuration for the TU Muenchen and IdeaConsult servers. - http://git.io/rp9JOQ
13:12 CIA-46 bioclipse.opentox: Egon Willighagen master * rbd06066 / (4 files in 4 dirs): Properly marked the IOpenToxManager methods with 'throws' clauses if the implementation does. CreateDatasetWizard and AbstractOpentoxManagerPluginTest were updated accordingly - http://git.io/Vy0Mug
13:12 egonw oh, bugger
13:14 CIA-46 bioclipse.opentox: Egon Willighagen master * rf03b4b0 / (14 files in 8 dirs): Revert "Factored out OpenTox server configuration for the TU Muenchen and IdeaConsult servers." - http://git.io/rtgLQA
13:14 CIA-46 bioclipse.opentox: Egon Willighagen master * r1d40d13 / (6 files in 3 dirs): Revert "Added a plugin to register a locally hosted ambit2/,ontology/ installation" - http://git.io/t3BF0w
13:14 egonw better
13:14 egonw interesting patches, but not for master
13:23 Gpox egonw: the opentox_qsar did not build either
13:23 egonw ah :)
13:23 egonw it was blue, though
13:23 Gpox it seams that a lot of repos did not get built ok last friday
13:23 egonw ah, ic
13:24 Gpox yeah but it was old
13:27 egonw Gpox++ (for the Hudson template for making binary releases!!!!)
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16:59 CIA-46 bioclipse.ds: Arvid Berg 2.5.x * r1c4a086 / (8 files in 2 dirs): Renamed project to match feature id - http://git.io/S6jLTw
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