Camelia, the Perl 6 bug

IRC log for #bioperl, 2009-07-11

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All times shown according to UTC.

Time Nick Message
01:17 kyanardag_ joined #bioperl
01:44 Emos joined #bioperl
01:44 Emos hello there!
01:44 Emos how are you?
01:45 Emos hello there!
01:45 Emos how are you?
01:46 Emos I was tryingo to use the script
01:46 Emos that deafferret made for me
01:46 Emos http://github.com/jhannah/sa‚Äčndbox/blob/master/emos/x.pl
01:47 Emos but I noticed that it doesn't download the right refseq sequences
01:47 Emos for the genes I request
01:48 Emos for example, for gene 54806 (AHI1) it downloads a seq on chr 6, that's right
01:48 Emos but from 39774566..39988359 in chr6, while AHI1 is on chr 6 but from 135.6XX.xxx to 135.8XX.xxx.
01:49 Emos I thought maybe this is caused by the fact that it gets sequences from GenBank
01:49 Emos instead of RefSeq
01:49 Emos can anyone help?
01:49 Emos thanks
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