Camelia, the Perl 6 bug

IRC log for #bioperl, 2009-08-07

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All times shown according to UTC.

Time Nick Message
01:11 torbjorn joined #bioperl
04:49 kanzure joined #bioperl
08:00 Meteorswarm joined #bioperl
11:29 gwo joined #bioperl
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18:36 xp_prg joined #bioperl
18:36 xp_prg wow I didn't know this existed wow!
18:36 xp_prg anyone want to talk newbie time to me?
19:51 deafferret xp_prg: "newbie time"      :)
19:51 deafferret man, this channel is dead when I leave it
19:51 deafferret rbuels: why didn't you stop me yesterday? I ran my bike into a swamp and killed the damn thing
19:52 deafferret dirty water in the oil == bad  :)
19:58 rbuels lol
19:58 deafferret when I say "&  stunt action!"  you STOP ME!!
19:58 rbuels engine needs to be rebuilt now i guess?
19:59 deafferret nah, just dis/re-assembled, dried, spark plug and air filter changed, oil, oil filter
19:59 deafferret only 1 hour labor
19:59 deafferret <--- idiot
19:59 deafferret "how deep is that?"
19:59 deafferret "it's not that deep"
19:59 deafferret "no problem"
20:00 nErVe joined #bioperl
20:00 rbuels you're lucky you didn't get it in the air intake
20:00 rbuels then it would have been new engine time
20:00 deafferret for an air-cooled 4-stroke dirt bike? really? I don't know jack-all about engines
20:01 deafferret except underwater = bad
20:01 deafferret he did it right away this morning so it didn't rust on me  :)
20:02 rbuels well, water is not compressible like air
20:03 rbuels so piston tries to compress the contents of the cylinder in preparation for firing of spark plug, but cannot because it's full of water....bad things.
20:04 rbuels usually leads to the breaking of something major.
20:04 rbuels like piston rings, or that arm under the piston, or something like that
20:05 deafferret oh. that sounds really not good at all
20:05 deafferret glad I apparently didn't do that  :)
20:05 rbuels yep
20:05 deafferret lotsa steam tho!  :)
20:05 deafferret glad I didn't crack the block
20:05 xp_prg speak newbie to me!
20:05 xp_prg :>
20:05 deafferret xp_prg: "newbie!"
20:05 rbuels "this is a computer"
20:06 deafferret rbuels: get out
20:06 xp_prg wait backup
20:06 xp_prg a what?
20:06 rbuels lol
20:06 deafferret oh... I have /kick!! woot!
20:06 * deafferret prepares a salvo, aims at rbuels
20:06 rbuels how did you get op
20:06 rbuels oh no
20:06 deafferret wmooo hahahahaha
20:07 rbuels he's just waiting for me to do something.  i can see it
20:07 deafferret rbuels: no, that wasn't a funny setup. try again
20:08 rbuels um...
20:08 deafferret @ende told ChanServ/NickServ that I'm Cool...
20:08 rbuels aiiii!!
20:08 deafferret I don't know how.
20:08 rbuels ...was that funny?
20:08 rbuels or...
20:08 deafferret tell me what to type and I'll op you
20:08 rbuels uh, ....
20:08 was kicked by deafferret: that wasn't funny either
20:08 rbuels joined #bioperl
20:08 * rbuels looks
20:08 rbuels um...
20:08 rbuels oh and also
20:08 * rbuels lools
20:08 deafferret lol
20:09 deafferret auto-kick rbuels
20:09 rbuels sigh
20:09 deafferret xp_prg: are you getting all this? this will be on the final.
20:10 rbuels and also, learn to use version control
20:10 * deafferret wanders back off to swine-flu
20:10 xp_prg ya to make a 3d synthetic biological structure in an embryo be sure to kick rebuels
20:10 rbuels hmm
20:10 was kicked by deafferret: Only 4d synth structs allowed here
20:10 rbuels jeez
20:10 deafferret lol
20:11 xp_prg joined #bioperl
20:11 rbuels lol
20:11 deafferret what happened?
20:11 rbuels well aren't we getting slap-happy today
20:11 deafferret typo!! sorry!!  :D
20:12 xp_prg ok now, to make up for it, tell me bioperl stuffs
20:12 deafferret you could write this little Bio::SeqIO::fasta splitter thing for me
20:12 deafferret so we can cure swine flu
20:12 xp_prg you going to make a protein that blocks the receptor?
20:13 deafferret nah. I'm a programmer. I just pushed bytes around hard drives and pretend its important
20:13 rbuels with bioperl you can has teh annotations
20:13 rbuels and teh genes
20:14 rbuels with, like, alignments and stuff
20:14 rbuels and shoot your officemates with a PopGen
20:14 rbuels and...
20:14 rbuels and...
20:15 rbuels yeah.
20:16 xp_prg teach me shit!
20:16 deafferret I rep this crack like its chemistry got an F in chemistry
20:16 deafferret Took the white and turned it green now thats what i call chemistry
20:17 deafferret http://www.tsrocks.com/a/ace_ho​od_texts/loco_wit_the_cake.html
20:17 rbuels my $seq_in = Bio::SeqIO->new( -format => 'fasta', -file => $ARGV[0] );  while( $seq_in->next_seq ) { print 'i can has '.$seq->id."\n" }
20:17 deafferret lolcats
20:17 rbuels my $seq_in = Bio::SeqIO->new( -format => 'fasta', -file => $ARGV[0] );  while( $seq_in->next_seq ) { print 'i can has '.$_->id."\n" }
20:17 rbuels woops
20:17 deafferret haz
20:17 rbuels oh.
20:17 rbuels shit.  i can't do anything right.
20:17 * rbuels is moving to a different field
20:18 rbuels maybe...financial modelling
20:18 rbuels yeah
20:18 rbuels that's the ticket
20:18 deafferret you did great getting kicked earlier
20:18 rbuels oh.
20:18 deafferret wanna join my pro dirt bike team?
20:18 rbuels PROTIP: don't run yur bike into the water dudez! lolOKl8erz!
20:19 deafferret http://www.youtube.com/results?search_q​uery=Enduro+at+Erzberg&amp;search_type=
20:20 rbuels i bet the residents of erzburg love it
20:20 rbuels er, berg
20:22 deafferret hellz, ya. a gajillion tourist dollars. it's held in a big strip mine, so they don't care
20:22 * deafferret loves offering informed opinions about things of which he knows nothing
20:22 rbuels oh man come on i'm much better at that than you
20:22 rbuels you have the judiciousness of your years
20:23 rbuels whereas my hubris is unbridled.
20:23 deafferret did you just call me old?
20:23 rbuels pure.  unsullied by should haves or could haves, whys and wherefores
20:23 rbuels like a baby kitten
20:23 rbuels stroke it.  stroke my hubris.
20:23 deafferret I'm 37. What? I'm 37. I'm not old. Well I can't just call you 'man.' When you could say 'Dennis'...
20:24 deafferret jerk. you just made me spit-take on my keyboard
20:25 rbuels xp_prg: welcome to bioperl.
20:25 deafferret lol
20:25 deafferret woo! now *this* is a party!
20:25 rbuels pdx hackathon last night was fun
20:25 deafferret I think BioPerl and #bioperl are VERY different experiences. As it should be.  :)
20:26 deafferret oh? what'd you hack?
20:26 rbuels like #moose and #moose-dev
20:26 rbuels um, eulerbench i guess
20:26 rbuels and some just regular work stuff
20:26 rbuels i got a commit bit on DBIx::Class yesterday
20:26 rbuels fixed a bug in its pg backend
20:26 deafferret rbuels++
20:26 * rbuels puts a shiny badge on and puffs out his chest
20:27 deafferret xp_prg: why can't you be more like rbuels?
20:27 deafferret I think he got sick of me
20:27 deafferret and wandered off
20:27 * rbuels has well-delineated man-boobs due to his current ridiculous posture
20:28 deafferret might as well try one of those pumps then
20:28 rbuels i have 2 of them on right now
20:28 deafferret HOW IS ANY OF THIS COMPLETING TICKET 678 FOR ME??
20:28 rbuels that's why telecommuting is so great
20:29 rbuels comment on ticket 678: rbuels has well-delineated man-boobs
20:29 rbuels and balin leaves.
20:29 deafferret That's normal for PDX commute anyway, ain't it?
20:29 rbuels i dunno, i never mix with the unwashed.
20:31 * rbuels is now working
20:31 rbuels &
22:29 deafferret subroutine name to merge dictionaries? merge_dics() of course! PNAS!
22:29 * deafferret is 12
22:29 deafferret been hanging out with my son too much
22:30 rbuels ummm....
22:30 rbuels where is merge_dics()?
22:31 deafferret ENORBUELSALLOWED
22:31 * rbuels lools
22:32 deafferret I want you to fall out of your chair again. Twice.
22:32 deafferret what were we talking about with cfedde?
22:32 rbuels who is cfedde?
22:34 deafferret Chris Fedde was sitting up there with us when you fell out of your chair
22:34 deafferret I think. if not then, then shortly before that point
22:34 * rbuels did not know his nick
22:34 rbuels also did not recall his name
22:34 deafferret he's the LodgeNet pr0n king
22:34 rbuels oooh that's right
22:35 deafferret who wanted a ping sweep bot or something that you poo-poo'd
22:35 rbuels with his BO-RING parallel pinging
22:35 deafferret ya  :)
22:35 deafferret laugh
22:35 rbuels poo poo sir
22:35 deafferret rofl
22:35 deafferret you dick. you make we want to move to Portland
22:35 rbuels nah, parallel pinging is way more fun
22:36 rbuels and you can do that in omaha
22:36 rbuels lol
22:36 deafferret more perl nerds in PDX  :(
22:36 rbuels actually portland is pretty cool
22:36 rbuels yeah, pdx.pm is a good group
22:36 deafferret coding nerds in general too
22:37 deafferret bioinformatics is very non-codey here in NE  :(
22:37 rbuels it is in most places
22:37 rbuels cause they are focused on "biology"
22:37 rbuels and "research results"
22:37 deafferret boo boo sir
22:37 rbuels and "papers"
22:37 rbuels heh
22:37 deafferret screw that noise
22:37 deafferret "grants"
22:37 deafferret w
22:38 * deafferret merges some more dics
22:38 * rbuels gestures like Ace Hood
22:38 deafferret my boy's with his dad tomorrow. you need to fly to omaha and ride his bike tomorrow
22:39 deafferret kawasaki 125xr
22:39 rbuels hah
22:39 deafferret http://images.google.com/images?hl=en&amp;q=kawa​saki+125+kx&amp;gbv=2&amp;aq=f&amp;oq=&amp;aqi=
22:39 deafferret kx. pardon me
22:40 rbuels heh looks pretty cool actually
22:40 rbuels although i shall poo poo it on principle
22:40 rbuels because my personality allows me to do nothing less
22:40 rbuels damn i'm hungry, when is my wife gonna get home
22:40 deafferret fat rides for me: http://images.google.com/images?gbv=2&​amp;hl=en&amp;sa=1&amp;q=honda+xr250r&​amp;aq=f&amp;oq=&amp;aqi=&amp;start=0
22:41 rbuels that's rather larger
22:41 deafferret indeed. don't make me eat you.
22:41 rbuels wow.  dirt bike pictures are plentiful on the interwebs
22:43 deafferret I'll probably be able to talk $boss into going again Sunday. He, too, is bite-size.
22:43 rbuels nom nom
22:48 deafferret oh, snap. 2Pac "Changes" lyrics now wrong...
22:48 deafferret And although it seems heaven sent,
22:48 deafferret we ain't ready to see a black President, uhh.
22:48 deafferret It ain't a secret don't conceal the fact...
22:48 deafferret the penitentiary's packed, and it's filled with blacks.
22:48 deafferret But some things will never change.
22:48 deafferret take that!
22:49 * deafferret is easily distracted by radio lyrics today
22:49 rbuels you want him to take that in *addition* to getting shot?
22:49 rbuels you're mean
22:49 deafferret he's not dead. you can see him in loco w/ cake video background
22:50 rbuels whoa, he's gained some weight
22:50 rbuels guess he really has been going loco with that cake
22:50 deafferret he ate biggie smalls
22:50 deafferret lol
22:50 deafferret (that's how biggie died)
22:50 rbuels ?
22:51 rbuels somebody ate him?
22:51 rbuels i thought he got shot too
22:51 deafferret try to keep up
22:52 rbuels "do try to keep up" is a little better
22:52 rbuels i'm a fine connoisseur of the ridiculous turn of phrase
22:52 deafferret yes, in PretentiousBastardia
22:52 rbuels i am the Eternal Chairman of PretentiousBastardia
22:53 rbuels i learned a funny chinese phrase the other day
22:53 rbuels if i learn one phrase in another language, i like it to be something that will always get a laugh
22:53 rbuels if i were not an english speaker, i would probably learn the phrase "gee willikers"
22:53 rbuels or maybe "oh pickles"
22:54 rbuels in chinese, there's a funny phrase:
22:54 rbuels "i swear by Chairman Mao"
22:54 rbuels which they used to teach school children in the 50
22:54 rbuels s
22:54 rbuels but nobody uses anymore
22:54 rbuels now, if only i could pronounce it.
22:54 deafferret :)
22:56 rbuels so if you had an external cgi application.
22:56 rbuels like, oh, i dunno, gbrowse
22:56 rbuels and you wanted to seamlessly integrate it into a webgui site
22:56 rbuels how would you do it
22:57 * rbuels is hungry enough that if he had any cake, he would go loco with it
22:58 deafferret huh. I think we did that here already. For some values of "seamlessly"
22:58 * rbuels has a strict value of seamlessly
22:59 deafferret basically it just loads a frame with gbrowse in it I think
22:59 deafferret they can't dynamically load new data or anything
22:59 rbuels fail.
22:59 deafferret are you wanting gbrowse? or just a bunch of integrated Bio::Graphics bobbles?
22:59 rbuels must share a dynamic site header.
22:59 rbuels must share css
23:00 rbuels must share javascript doohickies
23:01 deafferret sharing doohickies is what killed biggie smalls
23:04 rbuels man i need to keep up
23:05 deafferret do try
23:05 * rbuels applauds
23:12 deafferret damn, I'm good. it's amazing what you can do once you've been practicing for 15 years
23:12 deafferret s/you/I/g
23:14 deafferret rbuels: so what were we talking about when you fell out of your chair? I spaced it
23:14 rbuels i don't remember
23:14 deafferret do try
23:15 rbuels hahaha
23:15 rbuels hold on i'm practicing lionel ritchie's vocal part from 'endless love'
23:15 rbuels ok
23:15 rbuels ummm...
23:15 rbuels what was it
23:16 rbuels confound was across the table also
23:16 rbuels and i think it was something he said
23:16 rbuels shit.  i can't remember it
23:16 rbuels there.  i tried.
23:17 * rbuels restarts the mp3
23:22 * deafferret wonders if this sandwich in the "kitchen" is up for grabs
23:23 rbuels if you eat it standing right there, you're less likely for whoever's sandwich it is to get mad
23:23 rbuels cause at that point, it's kind of like a dog finding something and eating it
23:24 rbuels whereas if you cart it away and eat it, it seems more premeditated
23:24 rbuels that's my theory, anyway.
23:24 * deafferret wraps his torso w/ phonebooks to prepare for a good shanking
23:24 * deafferret loves The Wire references
23:25 rbuels i should watch that
23:25 rbuels everything i've heard about it sounds good
23:25 rbuels that, and the sopranos i guess
23:26 deafferret I didn't care for the sopranos much.
23:26 deafferret I watched a few episodes and failed to suppress my wtf
23:27 rbuels what else should i watch
23:27 rbuels maybe i'll get a netflix account
23:27 deafferret ya, you could super-slam all of The Wire w/ Netflix
23:28 deafferret that's what I did. I get 1 of our 3 discs.
23:28 deafferret 3 discs on our account. $self, $wife, and $son have their own queues
23:28 * rbuels is not up on the netflix lingo
23:28 rbuels super-slam?
23:29 deafferret do try to understand
23:29 * rbuels slaps his forehead
23:29 rbuels if i was op, i would /kick mysel
23:29 rbuels f
23:29 deafferret you could get 3 discs at once, 3 episodes per disc (average), by the time you ship 1st disc back you'll wrap up 3rd, and bam! 6 more hours you have to watch
23:30 deafferret see? full time!
23:30 rbuels unnh
23:32 deafferret jhannah--
23:32 rbuels ?
23:32 deafferret turns out IN and IN are the same. dufus
23:32 rbuels wow.
23:33 deafferret IN2 is a better 2nd filehandle in the same block
23:33 rbuels um.  is this perl?
23:33 rbuels are you using global filehandles?
23:33 * rbuels gets out his stick
23:34 deafferret hellz ya, beotch. I learned PERL in 1993
23:34 rbuels open should ALWAYS be followed by a my
23:34 deafferret do tell
23:34 deafferret lol j/k
23:34 deafferret s/^/do /
23:35 deafferret you may have all that fancy book learning, but I grew up in the streets
23:36 * rbuels gets out his shank
23:36 rbuels reaches for his grip
23:36 rbuels ugh
23:36 deafferret I DIDN'T EVEN EAT YOUR SANDWICH!!! (yet!)
23:36 * rbuels reaches for his grip
23:36 was kicked by deafferret: self defense!
23:36 rbuels joined #bioperl
23:36 rbuels *boom*boom*boom*
23:36 was kicked by deafferret: restraining order!
23:37 rbuels joined #bioperl
23:37 rbuels sucka~!
23:37 deafferret violator
23:37 rbuels can you tell that i'm just killing time...
23:37 deafferret isn't that called 'life' ?
23:38 rbuels please bestow upon me the wisdom of your years
23:39 rbuels ok, i'm almost rehearsed up on 'endless love'
23:39 deafferret open (IN, "filename.txt") {  while (<IN>) {  open(IN, "otherfile.txt") ...
23:39 rbuels if you used lexical filehandles.
23:39 * rbuels sighs.
23:39 rbuels but that was a good response
23:39 * rbuels applauds
23:40 deafferret does that work?  open my $in (   ) {    open my $in  .... ?
23:40 * deafferret tries
23:40 rbuels no it will at least give you a redef warning
23:41 deafferret I don't use warnings! ha! gotya again!
23:41 deafferret see, your Enlightened Perl is useless to me
23:41 * rbuels is about to have a transient ischemic attack
23:41 deafferret lol
23:41 deafferret merge_dics2() is coming along nicely.  PERL++
23:43 * rbuels twitches
23:43 * rbuels grunts
23:43 rbuels facebook sucks
23:44 rbuels i hope their proprietary asses get kicked.
23:44 deafferret damn. sammich is gone. /me blames the guy yelling russian into a cell phone in the hallway
23:44 * deafferret swabs for mustard
23:48 deafferret hmm... gonna commute while I contimplate my next PERL move
23:48 * deafferret does

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