Camelia, the Perl 6 bug

IRC log for #bioperl, 2009-09-24

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All times shown according to UTC.

Time Nick Message
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20:27 deafferret in-silico PCR: given two primers, find all the products?
20:27 deafferret in bioperl? or am I writing this from scratch?
20:27 deafferret contributing it?
20:30 deafferret I've written this over and over again, but now have a formal request for some a Real Version
20:30 deafferret regex matching has been my weapon of choice so far
20:41 deafferret http://clab.ist.unomaha.edu/CLAB/index.php/RT742 ?
20:44 rbuels deafferret: sgn has a web tool for that
20:44 rbuels http://sgn.cornell.edu/tools/insilicopcr/
20:44 rbuels not sure how well it works....
20:45 deafferret are those people trustworthy? I've heard things... :(
20:45 deafferret oops
20:46 rbuels it might not be general enough actually
20:46 rbuels it's blast-based
20:46 deafferret blast, eh?
20:46 * deafferret rubs rbuels' chin
20:47 deafferret didn't think blast was terribly reliable on things as short as many primers
20:47 deafferret but I wouldn't know
20:49 rbuels yeah i don't know either
20:59 deafferret I'm sorry I disparaged your fine institution. I was just trying to make you like me.
21:01 rbuels do you need something to work on?
21:01 rbuels heh
21:01 * rbuels is no fun anymore
21:01 * deafferret wonders if this would fit as a BioPerl contribution, and if so which internal components should be existing Bio:: mojo
21:02 deafferret ya. I miss my shoving buddy. Stupid pregnant mistresses ruining everything.
21:14 ptl_ joined #bioperl

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