Camelia, the Perl 6 bug

IRC log for #bioperl, 2010-03-23

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All times shown according to UTC.

Time Nick Message
00:01 driley joined #bioperl
01:46 ericlee joined #bioperl
01:46 ericlee hi, what's the meaning of MSG: seq doesn't validate, mismatch is 2114
01:53 deafferret nopaste what you did to get that / your code / the full error
01:59 ericlee okay
01:59 ericlee I will paste
02:00 ericlee My code: http://pastebin.com/MuSUZHQy
02:01 ericlee The sequence: http://pastebin.com/WwHuTP2D
02:02 ericlee The error message: http://pastebin.com/RrUFp9VR
02:02 ericlee Thanks very much.
02:02 deafferret sure. if you can do that all in one paste next time I'd appreciate it  :)
02:02 ericlee Actually my script works well for other sequences, just this sequences.
02:02 ericlee Oh, sorry
02:03 deafferret no worries. looking
02:04 deafferret try adding -format=>'fasta'  to line 26
02:07 ericlee fixed, thanks very much~
02:08 deafferret :)
04:40 driveby_bot joined #bioperl
04:40 driveby_bot /home/svn-repositories/bioperl: r16925 (cjfields) : add some links to relevant module for docs
04:40 driveby_bot Diff: http://tinyurl.com/yz9lm5v
04:41 * deafferret clutches pyrimidine's chest, collapses
04:47 driveby_bot joined #bioperl
04:47 driveby_bot /home/svn-repositories/bioperl: r16926 (cjfields) : more linky fixes
04:47 driveby_bot Diff: http://tinyurl.com/ya6jntj
04:52 deafferret ditto
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17:59 deafferret ...o.  .   .
17:59 flu joined #bioperl
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20:31 deafferret http://www.homestarrunner.com/systemisdown.html
20:31 deafferret me: 404
20:31 deafferret $corporate_admin: everything looks fine
20:31 deafferret me: open a browser. see that 404?
20:31 deafferret $corporate_admin: I have a conference call
20:32 deafferret me: ok.
20:36 driveby_bot joined #bioperl
20:36 driveby_bot /home/svn-repositories/bioperl: r16927 (maj) : idea of bernd: set id first, then seq, so seq errors can use the id
20:36 driveby_bot Diff: http://tinyurl.com/ylg27ft
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