Camelia, the Perl 6 bug

IRC log for #bioperl, 2010-08-21

| Channels | #bioperl index | Today | | Search | Google Search | Plain-Text | summary

All times shown according to UTC.

Time Nick Message
00:04 perl_splut left #bioperl
04:34 CIA-95 bioperl-live: Chris Fields master * r1ea39f3 / Bio/Tools/dpAlign.pm : throw, not croak - http://bit.ly/azz42b
04:36 CIA-95 bioperl-live: Chris Fields master * rfa93c59 / Bio/RangeI.pm : clarify range - http://bit.ly/csiLcE
06:36 ank left #bioperl
08:08 brandi joined #bioperl
08:08 brandi left #bioperl
15:54 * deafferret throws a croak
16:13 rbuels deafferret: throws?
16:14 * rbuels throws an exception to that
16:15 * deafferret croaks Thoreau
16:15 * rbuels croaks nevermore
16:26 kblin four dependency packages to go...
16:26 rbuels kblin: what are you building?
16:27 kblin rbuels: opensuse rpms of bioperl
16:27 kblin or rather (open)suse
16:27 rbuels kblin: you the official maint for them?
16:27 rbuels kblin: (is there an official maint?)
16:27 kblin so far there's no official package
16:27 rbuels kblin: there's one in debian
16:27 kblin in suse, I mean
16:27 * rbuels says nanny nanny boo boo
16:27 kblin yeah, I know
16:28 kblin but we've got a SLES server at work
16:28 rbuels kblin: you're in tuebingen?  i seem to recall
16:28 kblin yeah
16:28 * rbuels nods
16:28 deafferret hows this for cheesy/folksy?  I'm such a nerd.   http://mutationgrid.com/faq   Q: Where did the name 'Mutation Grid' come from?
16:30 rbuels hehe
16:30 rbuels deafferret++ # cheese whiz
16:31 deafferret :)
16:32 kblin I'm running on ubuntu myself
16:33 rbuels kblin: what is your job title in tuebingen?  are you a dev or postdoc or grad student or what?
16:33 * rbuels is a senior dev
16:35 deafferret is 'senior' a warning about forgetfullness, naps?
16:35 rbuels deafferret: i also sometimes need to sit down
16:35 deafferret chairs++
16:35 deafferret working all weekend! woot!!! commutin' time!
16:39 kblin rbuels: I'm a grad student in a microbiology lab
16:39 rbuels kblin: you're an experienced dev too though, it seems?
16:39 rbuels kblin: at least you know git, heh
16:39 deafferret ooo, neato. I managed to confuse 'git status'
16:39 deafferret w/ perm problems in .git/
16:40 kblin rbuels: well, I've been doing open source for a couple of years now. I got started in 2005 doing a GSoC for Wine (also my b.sc. thesis)
16:40 rbuels kblin: so you did a b.sc in CS?
16:41 kblin computational biology, which is part of the comp-sci faculty in tübingen
16:42 rbuels kblin: how did Wine relate to computational biology?
16:42 kblin well, technically I got a "Diplom" in comp-biol
16:43 kblin and we have to do a b.sc.-like thesis before that, and we could do classical comp-sci work for that
16:43 kblin for my Diplom thesis, I analyzed subtrate specifity of two Streptomyces viridochromogenes enzymes
16:44 kblin anyhow, got to catch a bus, be back later..
16:44 rbuels kblin: ok ttul
16:44 rbuels s/u/y/ lol
17:02 brandi joined #bioperl
17:03 brandi left #bioperl
18:01 deafferret rbuels: I see you near the end!  http://www.youtube.com/wat​ch?v=Gwq10W0RaHQ&hd=1  moose gource
18:01 deafferret neato
18:01 * rbuels was not aware that was recorded
18:02 rbuels oh i see
18:02 deafferret rbuels++ # super hero
18:04 rbuels lol
18:04 rbuels i didn't see myself.  must have blinked.
18:05 deafferret nah, towards the end you float from the bottom right corner slowly across the middle
20:41 kblin gource is fun, but for larger projects it's kind of boring at times
20:44 deafferret programmers as action heros!
20:44 deafferret heroes?
20:44 deafferret hoagies?
20:44 * deafferret drools
20:45 kblin ah, nice
20:45 kblin I think I just got all bioperl deps accepted into opensuse
20:46 kblin now I just need to figure out why bioperl itself fails to pass "make test" on SLES11, and then for pyrimidine to release 1.6.2
20:46 kblin I'll do that next week then :)
20:57 kblin anyway, SIGBED
21:01 genehack left #bioperl
21:49 deafferret which test(s) are failing?

| Channels | #bioperl index | Today | | Search | Google Search | Plain-Text | summary