Camelia, the Perl 6 bug

IRC log for #bioperl, 2010-12-16

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All times shown according to UTC.

Time Nick Message
00:23 * deafferret stares blankly
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07:27 CIA-12 bioperl-live: hyphaltip topic/tree_api_refresh * r63d1d54 / Bio/SearchIO/fasta.pm : retrieve strand from SSEARCH (3.6) output - http://bit.ly/edI0jg
07:27 CIA-12 bioperl-live: hyphaltip topic/tree_api_refresh * r0f37a9d / Bio/Search/HSP/GenericHSP.pm : match SSEARCH - http://bit.ly/idG8zE
07:30 CIA-12 bioperl-live: hyphaltip master * rb4d3293 / Bio/Search/HSP/GenericHSP.pm : match SSEARCH - http://bit.ly/gpjTy5
07:42 CIA-12 bioperl-live: hyphaltip master * r30ce2c3 / Bio/SearchIO/fasta.pm : when processing SSEARCH get the strand info from the rev-comp line - http://bit.ly/dLJfKU
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16:54 dbolser hello
16:54 dbolser I have a file that calls a PM like this:
16:55 dbolser use AMOS::DotLib;
16:55 dbolser and the PM, which is presumably found, because I don't see any 'cannot find' death defines this stuff:
16:56 dbolser BEGIN {use Exporter (); @EXPORT      = qw(&printHeader ...);}
16:57 dbolser however, when I run the file (which contains lines like 'printHeader(\*DOT, "plotter");'
16:58 dbolser I get this errro:
16:58 dbolser Undefined subroutine &main::printHeader called at /homes/dbolser/build/AMOS2/bin/printScaff line 205.
16:58 dbolser w'sup wid' 'dat?
16:58 dbolser how should the export be done?
16:59 dbolser is the problem with the 'package DotLib' vs. use AMOS::DotLib;
16:59 dbolser ?
17:00 dbolser heh... I'm a genious!
17:10 deafferret :)
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