Camelia, the Perl 6 bug

IRC log for #bioperl, 2011-02-14

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All times shown according to UTC.

Time Nick Message
02:25 CIA-67 biome: Chris Fields topic/default_locations * ra899816 / MANIFEST : update MANIFEST - http://bit.ly/hhOUvB
02:27 CIA-67 biome: Chris Fields topic/default_locations * r6e09b05 / lib/Biome/Role/Location/HasLocations.pm : add stub for parameterizable role (may be renamed) - http://bit.ly/gq4Vy1
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15:23 CIA-67 biome: Chris Fields topic/default_locations * re120919 / (2 files): rename role - http://bit.ly/e4dV63
15:25 CIA-67 biome: Chris Fields topic/default_locations * rf714a9e / (7 files in 2 dirs): initial work on unifying contained locations with layered features/locations/etc, but breaks some tests - http://bit.ly/i8ltAY
15:26 kai pyrimidine: hey there
15:26 kai you guys planning to participate in GSoC again this year?
15:28 pyrimidine kai: I think so.  I'll be pretty busy myself, but I think rbuels may head it up again.
15:28 kai ok, so I can pimp BioPerl to prospective students, great :)
15:31 pyrimidine kai: yes, go ahead.  One of the plans I have is to eventually pull in last year's GSoC code from Jun into the master repo, but it has to wait until post-1.6.2
17:45 deafferret rbuels: pyrimidine just called you a slacker. you just gonna take that?
17:45 rbuels eh what?
17:45 rbuels i think he just said i may do gsoc again
17:46 * rbuels missed the slacker part
17:46 rbuels although i don't deny it of course, lol
17:46 deafferret :)
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20:12 CIA-67 bioperl-live: Chris Fields master * ref24026 / Bio/SeqIO/fastq.pm : checked each line for definedness, not falseness - http://bit.ly/fLwUyh
20:12 CIA-67 bioperl-live: Chris Fields master * r368ff0c / (3 files in 2 dirs): Merge branch 'master' of github.com:bioperl/bioperl-live - http://bit.ly/i5lK0e
20:23 CIA-67 bioperl-live: Greg Jordan topic/tree_api_refresh * re042204 / (t/Tree/TreeIO.t t/data/tree_parse_stress.txt): Add roundtrip stress tests to t/TreeIO.t -- includes the root branch length bug (bug3039) from release 1.6 - http://bit.ly/dR3Kur
20:29 CIA-67 bioperl-live: Greg Jordan topic/tree_api_refresh * r4689644 / Bio/Tree/TreeFunctionsI.pm : Set nhx as the default TreeFunctionsI::as_text output format. - http://bit.ly/fY0HX0
20:29 CIA-67 bioperl-live: Greg Jordan topic/tree_api_refresh * ra796ce6 / (t/Tree/TreeIO.t t/data/tree_parse_stress.txt): Small update to round-trip newick stress test input. - http://bit.ly/hOKuVc
22:20 pyrimidine Seems to be interest in bioperl6 out there.  Interesting....
22:36 * rbuels is waiting for rakudo to get faster
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