Camelia, the Perl 6 bug

IRC log for #bioperl, 2011-04-20

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All times shown according to UTC.

Time Nick Message
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14:46 pyrimidine rbuels: perl 5.14 RC1 is out http://www.perlmonks.org/?node_id=900327
14:51 * pyrimidine wonders if I can get that running on perlbrew....
14:52 kai pyrimidine: thanks for bioperl 1.6.2, btw
14:53 pyrimidine kai: np
14:53 kai I'll prepare some suse and debian packages once I find the time, in order to push them upstream
14:53 kai that makes my installer scripts so much easier :)
14:53 pyrimidine kai: just to warn you, I will probably push out a new point release this week to address a few bugs with that last one
14:54 kai oh, ok
14:54 kai I probably won't have time until after easter anyway
14:54 kai wearing my web-app-developer hat currently
14:54 pyrimidine had a few things that popped up related to new Bio::Phylo installations throwing errors on NeXML, and a few edge cases on Build.PL installs
14:55 pyrimidine but today I'm wearing new $job hat
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16:35 CIA-119 bioperl-run: Chris Fields master * r588ca1a / (4 files in 3 dirs): changes to deal with indexing of FASTA with dup ID failing with latest BLAST+ - http://bit.ly/gp0bL0
16:35 CIA-119 bioperl-run: Chris Fields master * r22eb8ef / t/SABlastPlus.t : BLAST+ tests passing so far, refs #3213 - http://bit.ly/fHunNo
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21:09 CIA-119 bioperl-run: Chris Fields master * rcf7d88a / (4 files in 4 dirs): get BLAST+ tests to actually finish w/o a crash using v. 2.2.24 and up - http://bit.ly/eOfit5
21:09 CIA-119 bioperl-run: Chris Fields master * r63a5b7b / t/SABlastPlus.t : get SABlast tests passing with v 2.2.24+ and up - http://bit.ly/ge5Lzn
21:09 CIA-119 bioperl-run: Chris Fields master * r606fc74 / t/SABlastPlus.t : fix hit count to go with database change, tests pass with BLAST+ 2.2.25+ - http://bit.ly/eBtpvq
21:09 CIA-119 bioperl-run: Chris Fields master * r6a8ba40 / lib/Bio/Tools/Run/StandAloneBlastPlus.pm : add comment on the required BLAST+ version, refs #3213 - http://bit.ly/g0uKIS
21:29 CIA-119 bioperl-run: Chris Fields master * r4435993 / (Changes MANIFEST): some initial Changes stuff, getting ready for a run release - http://bit.ly/gpIOng
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21:35 CIA-119 bioperl-run: Chris Fields master * rf6cebbc / Changes : some more Changes - http://bit.ly/gaAzbw

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