Camelia, the Perl 6 bug

IRC log for #bioperl, 2011-05-27

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All times shown according to UTC.

Time Nick Message
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00:47 ChesFTC Hi, I seem to have run across a bug in Bio::DB::BigWig, where if I request a region containing no data, I get the error "Can't call method "next_seq" on an undefined value at /usr/local/lib/perl/5.10.1/Bio/DB/BigWig.pm line 658"
00:47 ChesFTC I've seen this come up in the IRC logs for this channel, but there didn't appear to be any resolution
00:48 ChesFTC Should I submit a bug report, or does anyone know if this is fixed in trunk?
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02:23 rbuels ChesFTC: i don't know, but if you submit a bug it will get checked on
02:24 rbuels ChesFTC: chris is at the galaxy conference this week
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03:02 ChesFTC rbuels: Thanks
03:06 ChesFTC Apparently bugzilla says that submitting bugs for bioperl has been disabled?
03:11 rbuels ChesFTC: it's been moved to redmine
03:11 rbuels ChesFTC: http://www.bioperl.org/wiki/Bugs
03:30 ChesFTC http://www.bioperl.org/wiki/BioPerl still has the old address
03:36 ChesFTC Thank you, bug lodged :)
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04:23 rbuels ChesFTC: ah, thanks.  I update the link on the front page.
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18:59 jhannah rbuels: wow, that IS cool  http://min.us/l6ZZO
18:59 jhannah i wonder if all the splits are data or just art. i assume the latter
18:59 rbuels yeah it really is
19:00 rbuels i dunno
19:00 jhannah i also wonder if the last 50 year biodiversity drop is on par with "mass extinction" events or not
19:00 jhannah assuming there has been an man-made biodiversity plunge
19:01 jhannah or if its still mostly a threat at this scale
19:01 * rbuels imagines that tree with an hourglass indentation
19:01 jhannah hmm?
19:02 rbuels from biodiversity reduction
19:02 rbuels actually, i guess it would look like gaps probably
19:07 jhannah well the historic mass extinctions dont look very severe in this art
19:07 jhannah and i dont know if anyone is claiming humans have done equivalent damage
19:08 jhannah but this picture makes me think that we can do our worst and it wont be any worse than whas't already happened several times
19:08 * jhannah fires up the AC
19:08 jhannah actually, i am driving 4 hours with 3 ATVs and 2 dirtbikes tomorrow -- that should help
19:18 rbuels heh
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