Camelia, the Perl 6 bug

IRC log for #bioperl, 2011-07-15

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18:15 DeniseM Hey all.  I have a Perl module that uses Bio::DB::GFF to interface with a MySQL database.  I've confirmed that the data is in the database (I'm reasonably sure) but my $db->features call doesn't return anything (no errors).  How do I troubleshoot what's going on?  Here's a pastie of the code:  http://pastie.org/2210138  Thanks for any help
18:24 jhannah howd you get the data into MySQL?
18:25 jhannah export DBI_TRACE=1    to see what SELECT statements are being generated?
18:28 DeniseM hmm
18:29 DeniseM It's created via a large series of scripts that pull information from Ensembl :P
18:30 DeniseM that's a cool export
18:30 DeniseM gives me lots of information
18:35 DeniseM http://pastie.org/2219069  That appears to be where it's going wrong.  How can I tell what it's trying to execute after it gets the success (retrieves GRCh37)
18:36 DeniseM my ($features, $model_start, $model_stop) = $gff_gene_model->get_features($gmc, \%config);
18:37 DeniseM that's the line it's trying to run and getting no results
18:37 DeniseM aha!
18:37 DeniseM figured it out :D
18:40 DeniseM Thanks jhannah.  That export was all I needed. :)
18:40 DeniseM Have a good day!
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