Camelia, the Perl 6 bug

IRC log for #bioperl, 2011-10-18

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All times shown according to UTC.

Time Nick Message
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11:12 leont I have visualized the dependency tree of BioPerl-live
11:12 leont It's more complicated than I thought
11:13 leont GraphViz had issues converting it to png, because it didn't fit in the 32K width limit initially
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12:30 leont Got a pagerank of the data too now :-)
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14:34 jhannah leont: come back and tell me more
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16:00 ende https://gist.github.com/1295816   anyone know what the suggested limit on Bio::DB::GenBank queries is?
16:07 rbuels ende: doesn't look like you're hitting the limit, just looks like that web service is having problems
16:07 rbuels not unusual.
16:12 ende oh
16:12 ende just keep trying?
16:36 ende its gotta be a size limit rbuels, it works fine when I trim my list down to say 100 genes
16:36 ende my original query was huge
16:36 rbuels ende: maybe you're actually causing their stuff to error out, heh
16:37 * rbuels bets there are buffer-overflow attacks against ncbi's web backends since they are probably written in C
16:37 ende haha
16:37 rbuels (by biologists)
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