Camelia, the Perl 6 bug

IRC log for #bioperl, 2012-08-13

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All times shown according to UTC.

Time Nick Message
08:43 leont joined #bioperl
11:36 carandraug joined #bioperl
12:02 kai ah crap...
12:04 * kai found another hmmer2 parser bug
12:04 kai and this one probably is my fault
12:05 kai I wonder why the unit tests didn't catch it, though
12:46 hash_table joined #bioperl
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22:15 carandraug hey! Can I use bioperl to search for a sequence inside another sequence? Not a simple m//, I want to have ATG match against WTN for example
22:21 leont Not sure if that's build in, though I do have a module Bio::DNA::Incomplete to convert WTN into a suitable regexp that you can put into m//
22:37 carandraug leont, is that module already part of bioperl?
22:37 leont No, it isn't
22:38 carandraug leont, do you have it somewhere?
22:38 leont It's on CPAN
22:38 leont See https://metacpan.org/module/Bio::DNA::Incomplete
22:40 carandraug leont, sweet. Thank you very much
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