Camelia, the Perl 6 bug

IRC log for #bioperl, 2013-02-09

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All times shown according to UTC.

Time Nick Message
02:37 looper joined #bioperl
19:04 carandraug joined #bioperl
19:04 carandraug joined #bioperl
19:48 MohsenT joined #bioperl
20:16 carandraug hey! I'm trying to merge the stuff from bioperl-live in the FeatureIO repository but having trouble resolving the conflicts for the tests files. I don't know much about the tests part. Could anyone help me?
21:39 carandraug anyone, please? I have fixed all other conflicts. The tests are the only ones I don't know a thing.
21:41 carandraug well, if anyone wishes to do this, here's the conflict http://bpaste.net/show/76299/
21:43 carandraug HEAD is what's in Bio-FeatureIO repository. prepared_repo is a  filtered branch of bioperl-live to have only the commits related to what's in Bio-FeatureIO
21:45 carandraug the problem also comes from the fact that on March 2012 this file changed name. But there have been new tests added to it that are not on the Bio-FeatureIO repository. The list of commits, before and after the file rename are
21:45 carandraug https://github.com/bioperl/bioperl-live/‚Äčcommits/master/t/SeqFeature/Annotated.t
21:49 carandraug it's just those two commits. The one at the bottom is also a rename but that shouldn't be a problem. The problem is that I have no idea what the ok, is_ok, etc functions do. It seems taht those are the actual tests but some have since been removed on the Bio-FeatureIO.
21:50 carandraug Plus, the documentation of test_begin() says that it requires the number of tests. But that argument been removed on the Bio-FeatureIO repo. It seems that tests are done different there.

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