Perl 6 - the future is here, just unevenly distributed

IRC log for #bioperl, 2014-12-19

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All times shown according to UTC.

Time Nick Message
00:56 fruittie joined #bioperl
08:29 fruitcake joined #bioperl
11:08 dbolser hihi
11:09 dbolser anyone compiled Bio::DB::SAM for htslib? (SAMTOOLS 1.1)?
11:10 dbolser we need CSI support
13:06 sojourn joined #bioperl
13:23 dbolser hi
13:30 fruittie joined #bioperl
13:37 fruitorama joined #bioperl
13:50 scottcain joined #bioperl
14:13 flu joined #bioperl
14:17 dbolser hihi
14:17 dbolser anyone compiled Bio::DB::SAM for htslib? (SAMTOOLS 1.1)? We need CSI support...
14:47 * dbolser fixes scottcain and flu wiht a steely gaze...
14:52 samb1 :/ wish I could answer but not sure... it's v.quiet in here!
15:03 fruitorama yup
15:22 scottcain dbolser: not that I’ve heard of; sorry.
15:43 flu dbolser, not I
15:48 * dbolser averts his gaze
15:48 dbolser ;-)
15:58 fruittie joined #bioperl
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16:08 dbolser Where else should I ask?
16:08 samb1 is there a mailing list?
16:08 dbolser CSI is important for sequences > ~ 0.5Gbp
17:09 trs dbolser: did you try it yourself?
17:09 trs i.e. are you just asking if anyone's tried it, or have you tried it and failed to get it to work?
17:15 trs ah right, Bio::DB::SAM, that's where I recalled seeing something w.r.t. htslib 1.1: http://sourceforge.net/p/samtools/mailman/message/32873075/
17:30 greencow joined #bioperl
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19:08 flu_ joined #bioperl
19:32 fruittie joined #bioperl

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