Camelia, the Perl 6 bug

IRC log for #cdk, 2007-10-25

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All times shown according to UTC.

Time Nick Message
04:17 jbrefort joined #cdk
05:24 CIA-15 cdk: rajarshi * r9198 /trunk/cdk/src/org/openscience​/cdk/qsar/ChiIndexUtils.java: Converted to Java 1.5 idioms
05:27 CIA-15 jmol: hansonr * r8513 /trunk/Jmol/src/org/jmol/ (11 files in 4 dirs): (log message trimmed)
05:27 CIA-15 jmol: version=11.3.38 VERSION
05:27 CIA-15 jmol: # bug fix -- draw in states
05:27 CIA-15 jmol: # bug fix -- antialiasing with translucent/POV-ray
05:27 CIA-15 jmol: # new feature: set antialiasTranslucent TRUE/FALSE
05:27 CIA-15 jmol: # along with antialiasDisplay and antialiasImages
05:27 CIA-15 jmol: # determines the extent of antialiasing. Requires
05:29 CIA-15 cdk: rajarshi * r9199 /trunk/cdk/src/org/openscience/cdk/qsar/des​criptors/molecular/ChiChainDescriptor.java: Updated so that 3-order descriptor uses a ring search for a cyclopropane ring rather than the UI. Fixes bug 1818626
05:35 CIA-15 jmol: hansonr * r8514 /trunk/Jmol/src/org/jmol/sha​pespecial/DrawRenderer.java:
05:55 CIA-15 cdk: rajarshi * r9200 /trunk/cdk/src/org/openscien​ce/cdk/graph/PathTools.java: Updated to Java 1.5 idioms
06:22 rojasm joined #cdk
07:20 jpansanel moin
07:59 egonw joined #cdk
08:03 jonalv joined #cdk
08:13 rojasm Happy birthday(gelukkige verjaardag) egonw !
08:14 egonw rojasm: dank je wel :)
08:14 egonw it's not for another two days ... :)
08:14 egonw but thanx anyway :)
08:15 rojasm ups
08:16 rojasm That is truh
08:17 rojasm I will congratulate again then
08:17 egonw hehehe
08:26 CIA-15 jmol: nicove * r8515 /trunk/Jmol/src/org/jmol/viewer/Jmol.properties: Version
08:40 egonw bbl
09:16 masak joined #cdk
09:21 egonw_ joined #cdk
09:30 CIA-15 cdk: egonw * r9201 /trunk/cdk/src/org/openscience/c​dk/tools/GenerateFragments.java: Removed try clause, as it no longer can happen.
09:30 masaks_evil_twin joined #cdk
09:31 egonw :)
09:32 masak joined #cdk
09:54 CIA-15 cdk: egonw * r9202 /branches/cdk-1.0.x/src/org/ope​nscience/cdk/qsar/descriptors/ (3 files in 2 dirs): Merged patch 9197: Fixed three more IAtom not found in cloned AtomContainer twin
10:16 CIA-15 cdk: egonw * r9203 /branches/cdk-1.0.x/patches.txt: Synched up to 9202 excl. 9199
10:21 egonw lunch time
10:57 jbrefort joined #cdk
11:17 CIA-15 cdk: egonw * r9204 /trunk/cdk/src/org/openscience/cdk/test/qsar/d​escriptors/molecular/XLogPDescriptorTest.java: Added InChIs for two molecules with charge separation.
11:18 CIA-15 cdk: egonw * r9205 /trunk/cdk/src/org/openscienc​e/cdk/test/CDKTestCase.java: Fixed two typo's.
11:18 CIA-15 bioclipse: ospjuth * r4051 /trunk/plugins/net.bioclipse/src/n​et/bioclipse/util/ImageUtils.java: Added a common info image
11:22 egonw_ joined #cdk
11:41 CIA-15 cdk: egonw * r9206 /trunk/cdk/src/org/openscience/cdk/tes​t/atomtype/AbstractAtomTypeTest.java: Placed in correct module.
12:26 CIA-15 cdk: egonw * r9207 /branches/cdk-1.0.x/src/org/openscience/cdk​/test/smiles/smarts/parser/ParserTest.java: Ported tests from the JavaCC/SMARTS JUnit test suite.
12:28 CIA-15 cdk: egonw * r9208 /trunk/cdk/src/org/openscience/cdk/test​/smiles/smarts/parser/ParserTest.java: Merged patch 9207 from branches/cdk-1.0.x: Ported tests from the JavaCC/SMARTS JUnit test suite.
12:33 jonalv joined #cdk
12:44 rojasm left #cdk
12:44 rojasm joined #cdk
12:53 CIA-15 bioclipse: carl_masak * r4052 /trunk/playground/plugins/net.bioclipse.expressi​on/src/net/bioclipse/expression/Calculator.java:
12:53 CIA-15 bioclipse: [Calculator.java]
12:53 CIA-15 bioclipse: * inner classes should be static unless a good reason
12:53 CIA-15 bioclipse:  to the contrary exists
13:15 CIA-15 bioclipse: carl_masak * r4053 /trunk/playground/plugins/ (4 files in 2 dirs): (log message trimmed)
13:15 CIA-15 bioclipse: [calculator tests]
13:15 CIA-15 bioclipse: * getInstance replaced by new
13:15 CIA-15 bioclipse: [Calculator.java]
13:15 CIA-15 bioclipse: * removed Singleton pattern
13:15 CIA-15 bioclipse: * removed vestiges of printing to standard output
13:15 CIA-15 bioclipse: * removed method factor
13:24 CIA-15 bioclipse: jonalv * r4054 /trunk/playground/plugins/net.bioclipse.expres​sion.tests/src/net/bioclipse/expression/tests/ (5 files): Extracted a base class for the tests and started a new test class where I will add more wanted functionality really soon now... :)
13:25 dleidert joined #cdk
13:32 CIA-15 cdk: rajarshi * r9209 /trunk/cdk/src/org/openscience/cdk/qsar/des​criptors/molecular/ChiChainDescriptor.java: Uses SSSR finder rather than looking for all rings
13:38 CIA-15 cdk: rajarshi * r9210 /branches/cdk-1.0.x/src/org/openscience/cdk/qsar​/descriptors/molecular/ChiChainDescriptor.java: Ported the fix for the ChiChain Descriptor, to avoid using the UIT to detect cyclopropane
13:40 CIA-15 bioclipse: carl_masak * r4055 /trunk/playground/plugins/net.bioclipse.e​xpression.tests/src/net/bioclipse/express​ion/tests/MultiParamFunctionsTest.java:
13:40 CIA-15 bioclipse: [MultiParamFunctionsTest.java]
13:40 CIA-15 bioclipse: * we will eventually want to support this: functions taking
13:40 CIA-15 bioclipse:  several parameters
13:50 CIA-15 bioclipse: jonalv * r4056 /trunk/playground/plugins/ (2 files in 2 dirs): Added test for variables
13:57 CIA-15 cdk: rajarshi * r9211 /trunk/cdk/src/org/openscien​ce/cdk/graph/PathTools.java: Fixed some PMD (idiotic) warnings
13:59 CIA-15 bioclipse: carl_masak * r4057 /trunk/playground/plugins/net.bioclipse.​expression/src/net/bioclipse/expression/ (14 files in 2 dirs):
13:59 CIA-15 bioclipse: * the constructor that takes variables now assigns to the instance field
13:59 CIA-15 bioclipse: * replaced many occurrences of HashMap with Map -- program against interfaces
14:28 CIA-15 bioclipse: jonalv * r4058 /trunk/playground/plugins/ (4 files in 2 dirs): Test for use of functions
14:31 CIA-15 bioclipse: ospjuth * r4059 /trunk/playground/plugins/net.bioclipse​.taverna.ui/src/net/bioclipse/taverna/ (4 files in 2 dirs): Refactored out action outside action contributor. Get a bloody ClassDefNotFoundEx when executing in a plugin. The dreaded classpath problem when invoking Maven builds in RCP.
14:38 CIA-15 bioclipse: jonalv * r4060 /trunk/playground/plugins/net.bioclipse.expres​sion.tests/src/net/bioclipse/expression/tests/ (4 files): regrouped the tests hierarchy a bit. Keeping code duplication as low as possible.
14:39 CIA-15 bioclipse: carl_masak * r4061 /trunk/playground/plugins/net.bioclipse.expressi​on/src/net/bioclipse/expression/Calculator.java:
14:39 CIA-15 bioclipse: [Calculator]
14:39 CIA-15 bioclipse: * syntactic support for multiple parameters
14:43 CIA-15 bioclipse: jonalv * r4062 /trunk/playground/plugins/ (2 files in 2 dirs): added license stuff and javadoc authors tag
14:47 CIA-15 bioclipse: carl_masak * r4063 /trunk/playground/plugins/net.bioclip​se.expression.tests/src/net/bioclipse​/expression/tests/FunctionsTest.java:
14:47 CIA-15 bioclipse: [FunctionsTest.java]
14:47 CIA-15 bioclipse: * removed inexplicably non-working @Override annotation
14:57 CIA-15 bioclipse: jonalv * r4064 /trunk/playground/plugins/net.bioclipse.expres​sion.tests/src/net/bioclipse/expression/tests/ (CalculatorBaseTest.java FunctionsTest.java): Added avg function to the FUNCTIONS paramater
15:08 CIA-15 jmol: hansonr * r8516 /trunk/Jmol/src/org/jmol/ (5 files in 3 dirs):
15:08 CIA-15 jmol: version=11.3.39_dev
15:08 CIA-15 jmol: # bug fix: antialias adjustments for hover text and background box
15:08 CIA-15 jmol: # bug fix: antialias fix for text color same as background and in front of translucent surface appearing transparent
15:09 CIA-15 bioclipse: jonalv * r4065 /trunk/playground/plugins/ (2 files in 2 dirs): Added args to our functionBody interface
15:12 CIA-15 bioclipse: carl_masak * r4066 /trunk/playground/plugins/net.bioclip​se.expression.tests/src/net/bioclipse​/expression/tests/FunctionsTest.java:
15:12 CIA-15 bioclipse: [FunctionTests.java]
15:12 CIA-15 bioclipse: * removed another @Override show-stopper
15:16 CIA-15 bioclipse: carl_masak * r4067 /trunk/playground/plugins/net.bioclip​se.expression.tests/src/net/bioclipse​/expression/tests/StringifyTest.java:
15:16 CIA-15 bioclipse: [net.bioclipse.expression.tests]
15:16 CIA-15 bioclipse: * deleted StringifyTest.java
15:25 CIA-15 bioclipse: jonalv * r4068 /trunk/playground/plugins/net.bioclipse.expres​sion.tests/src/net/bioclipse/expression/tests/ (3 files): Changes of tests inheritage structure (again)
15:31 CIA-15 bioclipse: jonalv * r4069 /trunk/playground/plugins/ (4 files in 2 dirs): s/jonathan/jonalv in javadoc author comments. (New Eclipse workspaces doesn't come with the properties which where set on old ones...)
15:33 CIA-15 bioclipse: carl_masak * r4070 /trunk/playground/plugins/net.bioclipse.​expression/src/net/bioclipse/expression/ (7 files in 2 dirs):
15:33 CIA-15 bioclipse: [net.bioclipse.expression]
15:33 CIA-15 bioclipse: * added new Function class Average
15:33 CIA-15 bioclipse: * adapted base class Function to take several parameters
15:33 CIA-15 bioclipse: * adapted classes deriving Function to respect this
15:37 CIA-15 cdk: rajarshi * r9212 /trunk/cdk/src/org/openscien​ce/cdk/graph/PathTools.java: Fixed some PMD warnings
15:40 CIA-15 bioclipse: jonalv * r4071 /trunk/playground/plugins/net.bioclipse​.expression.tests/src/net/bioclipse/exp​ression/tests/CalculatorBaseTest.java: implemented eval for the test avg function
16:33 demir joined #cdk
16:37 demir Hi there. First of all great library you created. It saves me a lot of work. However while visualizing molecules I encountered the problem that structures (rings etc.) are overlapping. I'm using the StructureDiagramGenerator and MoleculeViewer2D. Is this a bug or am i doing something wrong?
16:40 egonw hi demir
16:40 egonw the SDG does have some capabilities to solve overlap...
16:40 egonw but does not work for all problems...
16:41 egonw demir: I have to make some dinner now...
16:41 egonw will be back in some 30mins or so...
16:42 egonw will discuss some approaches you could use later
16:43 demir oh man thanks alot. Enjoy your meal!
17:07 egonw demir: around?
17:08 rguha joined #cdk
17:08 demir yes i'm here
17:08 rguha hi
17:08 egonw hi rguha
17:09 egonw demir: is it a particular class of molecules you want to layout...
17:09 egonw demir: if so, then I suggest to use a template...
17:09 egonw demir: btw, which CDK version are you using?
17:09 egonw there was some recent activity with SDG improvements...
17:09 demir no its not. its a molecule clustering programm where any kind of molecules could occur
17:10 demir i'm using cdk 1.0.1
17:10 egonw demir: OK... please grab the CDK jar from this site, and rerun the SDG layouts of the molecules...
17:10 egonw it should be a lot better...
17:11 egonw http://cheminfo.informatics.indiana.​edu/~rguha/code/java/nightly-1.0.x/
17:11 egonw the cdk-svn-20071025.jar...
17:11 egonw it's a prerelease of CDK 1.0.2
17:11 demir oh thanks alot. i will try it
17:12 egonw rguha: are you hacking on the annotation things?
17:12 rguha yes, unless you already started
17:12 egonw rguha: please put the annotation @interface things in net.sf.cdk ...
17:12 egonw no, have not done anything yet...
17:12 egonw need to work out a CINF@NO abstract
17:12 rguha why in net.sf.cdk? The checking code will need access to the class definition
17:13 egonw with Henry Rzepa...
17:13 rguha oh ok
17:13 egonw rguha: you're right... just put it in cdk.test.somewhere
17:13 rguha are you sure? Since the sources classes are being annotated
17:13 egonw btw, I was thinking of putting the M<module>TestSuite classes in a separate pacakage...
17:13 rguha you'd then have a dependency on the test classes
17:13 egonw rguha: another good point...
17:14 rguha i was thinking of cdk.annotations
17:14 egonw well... cdk.test == package != module
17:14 rguha any annottion (now or in the future) goes in there
17:14 egonw yes, sounds good
17:14 rguha right
17:14 rguha OK, I;ll get together a small case and see how it all works
17:16 demir me again. Just tried it and it looks perfekt now!!! No more overlappings for the tested molecules. Thanks again for this great library and the quick help.
17:18 egonw demir: more than welcome...
17:18 egonw demir: if you want to contribute to the project... you could consider writing up a small (one-page) application note for CDK News
17:18 egonw allows you to advertize your work a bit too :)
17:20 egonw anyone seen the Holmes Comet yet?
17:20 egonw it's cloudy here :(
17:21 demir what do you exactly mean by one-page. just a code snippet?
17:21 egonw something like:
17:21 egonw ... mom...
17:23 egonw http://almost.cubic.uni-koeln.de/cdk/cdk_to​p/cdk_news/archive/cdknews2.1.article10.pdf
17:24 egonw look for the
17:24 egonw 'Communication:' type articles in CDK News
17:26 egonw on these two pages:
17:26 egonw http://almost.cubic.uni-koe​ln.de/cdk/cdk_top/cdk_news/
17:26 egonw and
17:26 egonw cdknews.org
17:26 demir ah ok. I could try to. But I don't know if visualisation of molecules is so interesting. There are a lot of code snippets for that.
17:28 egonw no, but the clustering is :)
17:33 demir ok. I could try to. I have to write a documentation for my application at all. I wanted to do this in about 2-3 Weeks.
17:34 egonw demir: perfect
17:38 demir so long
18:02 CIA-15 cdk: egonw * r9213 /branches/cdk-1.0.x/src/org/openscience/cdk/qsar​/descriptors/molecular/ChiChainDescriptor.java: Removed J5 constructs.
18:20 CIA-15 cdk: rajarshi * r9214 /trunk/cdk/src/org/openscience/cdk/annotations/ (. TargetMethod.java): Added a package for annotations. Currently has a definition for test annotation that will allow us to mark up methods with their associated test methods
18:21 CIA-15 cdk: rajarshi * r9215 /trunk/cdk/src/org/openscience/c​dk/test/PcoreCoverageTest.java: Added a version of the CoverageTest class that utilizes annotations. Added a subclass that exercises it for the pcore module
18:22 CIA-15 cdk: rajarshi * r9216 /trunk/cdk/src/org/openscience/cdk​/test/CoverageAnnotationTest.java: Added a version of the CoverageTest class that utilizes annotations. Added a subclass that exercises it for the pcore module
18:25 rguha egonw: got annotation based coverage working, very sweet!
18:25 rguha it's committed
18:25 rguha try running PcoreCoverageTest
18:26 rguha you should see 18 missing tests in 6 classes
18:27 CIA-15 cdk: rajarshi * r9217 /trunk/cdk/src/org/openscience/cdk/ph​armacophore/PharmacophoreUtils.java: Updated source code with test class/method annotations.
18:28 rguha after the latest committ it should be 14 missing tests as I've added some anotations to the pcore source
18:38 egonw was on phone...
18:38 egonw will check now...
18:44 rguha k
18:44 egonw what's that @Documented and @Retention doing?
18:45 rguha @Documented ensure that the Javadocs get generated
18:45 rguha @Retention makes sure that the annotation is kept in at run tme, rather then discarded at compile time
18:45 egonw ah... interesting...
18:45 egonw the second...
18:46 egonw don't get the first one...
18:46 egonw why should it not be generated?
18:46 rguha It will be generated
18:47 egonw no, I meant... why is there need for that annotation?
18:47 egonw doesn't JavaDoc always create docs?
18:47 rguha but some annotations are discarded at compile time - example si @Documented - no need for doc annotations at run time
18:47 rguha I think annots get skipped
18:47 egonw you mean the JavaDoc will now be part of the class?
18:48 rguha ?
18:49 rguha basically, if the @Documented is there, you'll get a page for TargetMethod
18:49 rguha if it's not, there wll be no page
18:49 rguha I think
18:49 egonw ok... I still don't quite see the need... but will google :)
18:49 egonw btw, why TargetMethod and not TestMethod?
18:50 rguha actually I don't think I need the @Retention tag
18:50 rguha oops
18:50 rguha no reason
18:50 rguha probably should rename to TestMethod
18:50 rguha one sec
18:52 CIA-15 cdk: rajarshi * r9218 /trunk/cdk/src/org/openscience/cdk/ (4 files in 3 dirs): Updated to use the new annotation name
18:53 CIA-15 cdk: rajarshi * r9219 /trunk/cdk/src/org/openscience/cd​k/annotations/TargetMethod.java: Removed old annot interface
18:55 rguha should now be TestMethod
18:55 egonw updating...
18:57 egonw runDoclet:
18:57 egonw [echo] Not skipping doclet run...
18:57 egonw [java] Something wrong with the Java source file: src/org/openscience/cdk/an​notations/TestMethod.java
18:57 egonw mom...
18:57 egonw need to tweak the MakeJavafilesFiles.java
18:59 CIA-15 cdk: egonw * r9220 /trunk/cdk/src/net/sf/cdk/to​ols/MakeJavafilesFiles.java: Updated for annotation classes.
19:01 CIA-15 cdk: egonw * r9221 /trunk/cdk/src/org/openscience/c​dk/annotations/TestMethod.java: Added missing module declaration, and missing license info.
19:03 egonw The pcore module is not fully tested! Missing number of method tests: 18 in number of classes: 6
19:03 rguha hmm
19:03 egonw $ svn update
19:03 egonw At revision 9221.
19:03 rguha somethings wrong somewhere
19:03 rguha let me check
19:04 rguha I hope TestMethod doesn't clash with something from JUnit
19:04 egonw should not...
19:04 egonw different package
19:04 egonw so, sort of namespaced
19:08 egonw something else... can this annotation also be used to create output in the JavaDoc?
19:09 egonw so that in the JavaDoc we can point to the test class?
19:09 egonw would be rather interesting...
19:09 egonw as the test code is good example code
19:09 egonw btw, the output of the report looks quite ok...
19:10 rguha well right now it's not picking up annotations, which is weird
19:10 rguha refactoring always messes me up :(
19:10 rguha I'mnot sure whether Javadoc can pick up annotations (yet)
19:11 egonw looks like the @Retention is important
19:11 rguha nope, still does not seem to pick them up with retention
19:14 rguha aah, retention is indeed needed
19:14 rguha back in action
19:14 rguha one sec
19:14 CIA-15 cdk: rajarshi * r9222 /trunk/cdk/src/org/openscience/c​dk/annotations/TestMethod.java: added the retnetion meta annotation
19:15 CIA-15 cdk: rajarshi * r9223 /trunk/cdk/src/org/openscience/cdk​/test/CoverageAnnotationTest.java: cleaned up code
19:15 rguha ok, now you can test it
19:22 CIA-15 cdk: rajarshi * r9224 /trunk/cdk/src/org/openscience/cdk/test/ph​armacophore/PharmacophoreMatcherTest.java: Added a test case for getters and setters
19:22 CIA-15 cdk: rajarshi * r9225 /trunk/cdk/src/org/openscience/cdk/pha​rmacophore/PharmacophoreMatcher.java: Added more test annotations
19:24 egonw OK, systems seems to work well...
19:25 rguha nice
19:25 rguha just need to annotate 3000 methods :)
19:25 egonw hehehe :)
19:25 egonw sounds like a Junior Job to me :)
19:25 rguha agreed
19:25 rguha it'd also be a good idea to put an enrty on the wiki or somewhere for contributors on how to annotate new methods that get impkemented
19:26 egonw what about a CDK News article?
19:26 rguha sure
19:26 rguha could include the new source code links as well
19:26 egonw yes, indeed
19:27 egonw maybe even List<IAtom> stuff too?
19:27 rguha right
19:27 egonw "Post CDK 1.0 code clean up"
19:27 rguha sounds good
19:27 rguha I can set up an SVN for this or would you rather just swap a latex file back and forth
19:27 egonw no, SVN preferred
19:28 rguha ok
19:28 rguha i'll let you know when it's set up
19:28 egonw ack
19:28 rguha well, I have to go for office hours no
19:28 rguha w
19:28 rguha talk to you later
19:29 egonw ack
19:29 egonw ok
19:29 egonw will do some conversion myself now...
19:29 egonw oh, too late :)
20:27 CIA-15 cdk: egonw * r9226 /trunk/cdk/src/org/openscience/c​dk/annotations/TestMethod.java: This annotation is just for methods.
20:36 jbrefort joined #cdk
20:38 edrin joined #cdk
21:23 CIA-15 cdk: egonw * r9227 /trunk/cdk/src/org/openscience/​cdk/annotations/TestClass.java: Added annotation class that allows linking to the JUnit test.
21:26 CIA-15 cdk: egonw * r9228 /trunk/cdk/src/org/openscience/cdk/ph​armacophore/PharmacophoreUtils.java: Added example use of TestClass.
21:44 CIA-15 jmol: gutow * r8517 /trunk/Jmol/src/org/ (11 files in 2 dirs):
21:44 CIA-15 jmol: # webexport instruction updates.
21:44 CIA-15 jmol: # bug fix: webexport scriptbutton template had erroneous script names.
22:39 CIA-15 cdk: rajarshi * r9229 /trunk/cdk/src/org/openscience/cdk/pha​rmacophore/PharmacophoreMatcher.java: Added TestClass annotation
22:42 CIA-15 cdk: rajarshi * r9230 /trunk/cdk/src/org/openscience/cdk​/test/CoverageAnnotationTest.java:
22:42 CIA-15 cdk: Updated so that it gets the test class for a given source class from the
22:42 CIA-15 cdk: TestClass annotation for the source class. If the source class does not have a
22:42 CIA-15 cdk: TestClass annotation then it assumes nothing in that class has been tested (even
22:42 CIA-15 cdk: thogh invidiual methods might have a TestMethod annotation) and will output a
22:42 CIA-15 cdk: message
22:43 CIA-15 cdk: rajarshi * r9231 /trunk/cdk/src/org/openscience/cdk​/test/CoverageAnnotationTest.java: Fixed javadoc
23:21 CIA-15 cdk: egonw * r9232 /trunk/cdk/src/org/openscience/c​dk/test/PcoreCoverageTest.java: Typo.
23:51 CIA-15 jmol: hansonr * r8518 /trunk/Jmol/src/org/jmol/ (6 files in 2 dirs):
23:51 CIA-15 jmol: version=11.3.39 VERSION
23:51 CIA-15 jmol: # bug fix: antialias adjustments for hover text and background box
23:51 CIA-15 jmol: # bug fix: antialias fix for text color same as background and in front of translucent surface appearing transparent
23:51 CIA-15 jmol: # bug fix: antialias fix for applet
23:51 CIA-15 jmol: # webexport instruction updates.
23:51 CIA-15 jmol: # bug fix: webexport scriptbutton template had erroneous script names.
23:54 CIA-15 cdk: egonw * r9233 /trunk/cdk/src/org/openscience/cdk/ (4 files in 3 dirs): Reverted to a less ideal solution, but at least Nightly won't trip up now: no autocomplete classes in @TestClass annotation, but old fashion String

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