Camelia, the Perl 6 bug

IRC log for #cdk, 2008-04-10

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All times shown according to UTC.

Time Nick Message
05:04 jbrefort joined #cdk
06:31 rojasm joined #cdk
07:16 CIA-30 cdk: miguelrojasch * r10602 /cdk/ (170 files in 49 dirs): Synchronized with trunk; merged 10441:10601
07:32 de_maas joined #CDK
07:47 malick joined #cdk
07:50 jerome_ joined #cdk
07:51 CIA-30 cdk: miguelrojasch * r10603 /cdk/branches/miguelrojasch-CMLReact/src/tes​t/org/openscience/cdk/io/cml/CML2Test.java: removed comments for tests
07:52 jpansanel moin
07:53 rojasm moin
07:55 thomas_ku joined #cdk
07:58 thomas_ku moin
08:06 jonalv joined #cdk
08:31 CIA-30 cdk: miguelrojasch * r10604 /cdk/trunk/src/test/org/opensci​ence/cdk/io/cml/CML2Test.java: restored to previous commit 10601. The commit 10602 should have only been going to branches
09:01 egonw joined #cdk
09:01 CIA-30 cdk: miguelrojasch * r10605 /cdk/branches/miguelrojasch-CMLReact/ (.classpath .project): added name of the project in .project file
09:41 CIA-30 cdk: miguelrojasch * r10606 /cdk/branches/miguelrojasch-charges/ (179 files in 49 dirs): Synchronized with trunk/miguelrojasch-charges; merged 10335:10605
09:55 dleidert joined #cdk
10:04 CIA-30 cdk: miguelrojasch * r10607 /cdk/trunk/src/test/org/opensci​ence/cdk/io/cml/CML2Test.java: correction of errors
10:05 CIA-30 cdk: miguelrojasch * r10608 /cdk/branches/miguelrojasch-charg​es/src/test/org/openscience/cdk/ (3 files in 3 dirs): commit some class which were unversioned from trunk
11:05 CIA-30 cdk: miguelrojasch * r10609 /cdk/branches/miguelrojasch-CMLReact/​src/test/org/openscience/cdk/tools/St​ructureResonanceGeneratorTest.java: changing the results of one test
12:10 CIA-30 cdk: thomaskuhn * r10610 /cdk-taverna/trunk/src/main/java/org/o​penscience/cdk/applications/taverna/ba​sicutilities/CMLChemFileWrapper.java: Add two SuppressWarnings("unchecked") to reduce the amount of warnings
12:11 CIA-30 cdk: thomaskuhn * r10611 /cdk-taverna/trunk/src/main/java/org/openscie​nce/cdk/applications/taverna/qsar/model/weka/ (Selection.java Standardise.java): Add two SuppressWarnings("unchecked") to reduce the amount of warnings
12:12 CIA-30 cdk: thomaskuhn * r10612 /cdk-taverna/trunk/src/main/java/org/opens​cience/cdk/applications/taverna/tools/Remo​veMOLFilesWithoutStructureFromList.java: Add a new worker which removes MOL files from a list of strings which contains no structure. Each string represents one MOL file
12:12 CIA-30 cdk: thomaskuhn * r10613 /cdk-taverna/trunk/src/test/java/org/opensc​ience/cdk/applications/taverna/tools/Remove​MOLFilesWithoutStructureFromListTest.java: Add a Junit test for the new worker which removes MOL files from a list of strings which contains no structure. Each string represents one MOL file
12:13 CIA-30 cdk: thomaskuhn * r10614 /cdk-taverna/trunk/src/main/resources/ (2 files in 2 dirs): Add the new worker to the registry
12:13 CIA-30 cdk: thomaskuhn * r10615 /cdk-taverna/trunk/src/test/resources/da​ta/sdf/SDFileDemoWithoutStructures.sdf: Add a new test file for the new worker. This test file contains MOL files which do not have structures
12:13 thomas_ku joined #cdk
12:15 CIA-30 cdk: thomaskuhn * r10616 /cdk-taverna/trunk/src/test/java/o​rg/openscience/cdk/applications/ta​verna/tools/TagMoleculesTest.java: Rename a method. This was an old copy an paste error
12:38 egonw joined #cdk
12:41 rojasm egonw did you read my email from dev.list?
12:42 egonw no, not yet
12:44 rojasm not problem
13:16 dleidert egonw: was the CDK build issue on Debian forwarded to you?
13:16 dleidert egonw: first: hi ;)
13:17 egonw dleidert: did not see it
13:17 egonw feel free to put it in the BTS on SF
13:17 egonw feel free to -> please
13:18 dleidert seems to has been reported
13:19 dleidert yeah, has been forwarded to the sf.net BTS
13:31 CIA-30 bioclipse: jonalv * r5393 /bioclipse2/trunk/plugins/ (12 files in 6 dirs): moved mocked structuredb stuff from services to the structuredb plugin. Created IStructuredbManager with a bunch of standard methods and documented them. There is also a empty create structuredbinstance action now
14:44 carsten_ joined #cdk
15:26 CIA-30 bioclipse: carl_masak * r5394 /bioclipse2/trunk/plugins/net.bioclipse.ui/ (6 files in 4 dirs):
15:26 CIA-30 bioclipse: [net.bioclipse.ui]
15:26 CIA-30 bioclipse: * added dialog for search
15:29 CIA-30 bioclipse: jonalv * r5395 /bioclipse2/trunk/plugins/ (2 files in 2 dirs): Fixed test for creating and handling multiple database instances
15:34 thomas_ku joined #cdk
15:36 CIA-30 cdk: thomaskuhn * r10617 /cdk-taverna/trunk/src/main/java/org/opensci​ence/cdk/applications/taverna/io/iterative/ (2 files in 2 dirs): Add an iterative file writer as new worker to the package. This file writer will add text like another MOL file at the end of an existing file.
15:37 CIA-30 cdk: thomaskuhn * r10618 /cdk-taverna/trunk/src/main/resources/ (3 files in 2 dirs): Add the new iterative file writer to the list of worker within the registry
15:42 CIA-30 cdk: thomaskuhn * r10619 /cdk-taverna/trunk/src/test/java/org/op​enscience/cdk/applications/taverna/io/i​terative/IteratingFileWriterTest.java: Add a unit test for the new iterative file writer as new worker to the package. This file writer will add text like another MOL file at the end of an existing file.
15:42 CIA-30 cdk: thomaskuhn * r10620 /cdk-taverna/trunk/src/test/java/org/ope​nscience/cdk/applications/taverna/databa​se/pgchem/InsertMoleculeIntoDBTest.java: Change a file for this test
15:45 malick left #cdk
16:06 CIA-30 bioclipse: jonalv * r5396 /bioclipse2/trunk/plugins/ (3 files in 3 dirs): started writing on structuredbmanager and moved path handling into Hsqldbutil
16:07 CIA-30 bioclipse: ospjuth * r5397 /bioclipse2/trunk/plugins/net.bioclipse.services/ (28 files in 7 dirs): Major refactoring of net.bioclipse..services to allow for hooked-in service runners to allow for multiple jobs of same service.
16:23 CIA-30 bioclipse: ospjuth * r5398 /bioclipse2/trunk/plugins/net.bioclipse.biomoby/ (8 files in 2 dirs): Adapted Biomoby for new services API.
16:34 CIA-30 bioclipse: ospjuth * r5399 /bioclipse2/trunk/plugins/n​et.bioclipse.biomoby.tests/ (4 files in 2 dirs): Wrote test for drop actions and adapted to service API.
16:38 CIA-30 bioclipse: ospjuth * r5400 /bioclipse2/trunk/plugins/net.bioclipse.​biomoby.tests/src/testdata/2seqs.fasta: Added multipl seqs fassta file for testing drop.
16:39 CIA-30 bioclipse: ospjuth * r5401 /bioclipse2/trunk/plugins/net.bioclipse.b​iojava.ui.test/src/net/bioclipse/biojava/​ui/test/SequenceContentProviderTest.java: Do not catch exceptions in test.
18:16 egonw joined #cdk
18:56 CIA-30 jmol: nicove * r9258 /trunk/Jmol/src/org/jmol/translation/ (Jmol/Jmol-pt_BR.po JmolApplet/JmolApplet-pt_BR.po): Update of .po files
19:36 edrin joined #cdk

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