Camelia, the Perl 6 bug

IRC log for #cdk, 2008-06-19

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All times shown according to UTC.

Time Nick Message
02:37 CIA-33 jmol: hansonr * r9506 /trunk/Jmol/src/org/jmol/viewer/MouseManager.java: 11.5.42 for Charlie Xie. Mouse inMotion better selectivity
05:43 CIA-33 cdk: egonw * r11398 /cdk/trunk/src/test/org/openscience/cdk/ (23 files in 2 dirs): Added more missing unit tests
06:57 jpansanel moin
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09:37 CIA-33 cdk: egonw * r11399 /cdk/trunk/src/test/org/openscience/cdk/ (26 files in 2 dirs): Added more test classes
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14:11 rguha joined #cdk
14:11 rguha hi
14:14 egonw hi rguha
14:15 rguha hi egonw
14:15 rguha lots of eciting stuff going on with pcores and bioclipse
14:15 egonw yeah, saw some commits dropping in
14:16 egonw have not seen recernt screenshots
14:16 egonw bioclipse is cool
14:16 rguha we had a teleconf with Ola - showed us an alpha version
14:16 rguha pretty nice
14:16 egonw John was there too, I assume
14:16 egonw noticed the three of you on Skype
14:16 rguha right
14:17 rguha we're chatting again on 3rd july - if you'd like to join in
14:17 egonw I might
14:17 masak joined #cdk
14:17 egonw ping me that week, please
14:18 rguha sure
14:19 rguha btw, I'm going ahead and updating IAtomType to get rid of VdW getter/setter
14:20 egonw might you please do that in a branch
14:21 rguha oh ok  -how do I make a branch?
14:22 egonw svn copy https://bla/cdk/trunk https://bla/cdk/branches/rajarshi-vdw-removal/
14:22 egonw don't keep it in sych with trunk
14:22 egonw because that gives hell when merging back into trunk
14:22 rguha ?
14:22 rguha dont keep it in sync?
14:22 rguha i thought it'd be the other way
14:23 egonw if you do not keep it in sync, the branch will just contain the patches
14:23 egonw ... that need to be merged
14:23 rguha oh ok
14:23 egonw and not patches which were copied from trunk
14:23 egonw that's something miguel and I learned
14:23 rguha so right now I'm in sync with the latest trunk
14:23 egonw makes it harder to compare unit tests results, though
14:24 rguha aftr I make the branch I should not maintain sync with trunk. Is that correct?
14:24 egonw right
14:24 egonw upon making the copy, you're in sync
14:24 egonw but afterwards you loose that sync
14:25 CIA-33 cdk: rajarshi * r11400 /cdk/branches/rguha_vdw_removal/: New branch in which I'll remove VdW getter and setter from IAtomType and rework code so that it uses the PeriodicTable instead
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15:00 * egonw got his general sigmoid fit function worked out in R
15:25 CIA-33 cdk: egonw * r11401 /cdk/trunk/src/test/org/openscience/cdk/ (32 files in 2 dirs): Added last few IO format test classes
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18:45 CIA-33 cdk: rajarshi * r11402 /cdk/branches/rguha_vdw_removal/src/ (14 files in 10 dirs): Reoved VdW getter and setter from the atom type interface and updated all code that uses it.
19:12 CIA-33 cdk: rajarshi * r11403 /cdk/trunk/src/ (14 files in 10 dirs): Merged changes from rguha_vdw_removal r11400:11402 - vdw radii are no longer a property of specific atoms or atom types, but rther, shold be accessed via the PeriodicTable class
19:16 jpansanel SF is not fully available
19:16 jpansanel I cannot release the new version of Mychem :(
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19:55 CIA-33 cdk: egonw * r11404 /cdk/trunk/src/test/org/openscience/​cdk/io/formats/ChemFormatTest.java: Added missing test method + extra assertion
19:56 CIA-33 cdk: egonw * r11405 /cdk/trunk/src/test/org/openscience/cd​k/io/formats/ResourceFormatTest.java: More default method names
20:00 CIA-33 cdk: egonw * r11406 /cdk/trunk/src/main/org/op​enscience/cdk/io/formats/ (91 files): First bits of annotation for unit testing
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22:10 CIA-33 cdk: rajarshi * r11407 /cdk/trunk/src/ (3 files in 2 dirs): Fixed a bug so that when pcore query bond matches() are called, we first check whether we have the appropriate constraint and then check the constraint value

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