Camelia, the Perl 6 bug

IRC log for #cdk, 2008-12-11

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All times shown according to UTC.

Time Nick Message
01:11 timvdm joined #cdk
04:45 CIA-16 cdk: rajarshi * r13527 /cdk/branches/mark_rynbeek-vflib/src/​main/org/openscience/cdk/isomorphism/ (6 files): Added cdk.module tags
05:15 CIA-16 cdk: rajarshi * r13528 /cdk/branches/mark_rynbeek-vflib/src/​test/org/openscience/cdk/isomorphism/ (SubgraphIsomorphismTest.java VF2SubgraphIsomorphismTest.java): Added cdk.module tags and converted to JUnit 4
05:20 CIA-16 cdk: rajarshi * r13529 /cdk/branches/mark_rynbeek-vflib/src/​test/org/openscience/cdk/isomorphism/ (SubgraphIsomorphismTest.java VF2SubgraphIsomorphismTest.java): Made some fixes to let test code run
05:53 CIA-16 cdk: rajarshi * r13530 /cdk/branches/mark_rynbeek-vflib/src/​main/org/openscience/cdk/isomorphism/ (4 files):
05:53 CIA-16 cdk: Updated code to allow one to supply an IAtomContainer or an IQueryAtomContainer
05:53 CIA-16 cdk: as the query molecule. This necessitates a change in the bond matching code in
05:53 CIA-16 cdk: State.java - if the bond is a query bond we use matches() but if it is an
05:53 CIA-16 cdk: ordinary bond, we just check bond orders and atom symbols by hand.
05:53 CIA-16 cdk: rajarshi * r13531 /cdk/branches/mark_rynbeek-vflib/sr​c/test/org/openscience/cdk/isomorph​ism/SubgraphIsomorphismTest.java: Updated test code to recognize that the new isomorphism code needs the query molecules firts
05:55 CIA-16 cdk: rajarshi * r13532 /cdk/branches/mark_rynbeek-vflib/src/​test/org/openscience/cdk/isomorphism/​UllmanSubgraphIsomorphismTest.java: Converted test code to JUnit4
07:15 egonw joined #cdk
08:05 CIA-16 cdk: egonw * r13533 /cdk/branches/cdk-1.2.x/src​/test/org/openscience/cdk/ (12 files in 4 dirs): More unit test classes take advantage of get/setBuilder now
08:47 Gpox joined #cdk
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11:55 CIA-16 cdk: goglepox * r13534 /cdk/branches/jchempaint-primary/src/m​ain/org/openscience/cdk/renderer/gener​ators/ExternalHighlightGenerator.java: Fixed NPE in ExternalHighlightGenerator
13:04 jonalv joined #cdk
13:31 CIA-16 cdk: egonw * r13535 /cdk/branches/cdk-1.2.x/src​/test/org/openscience/cdk/ (11 files in 3 dirs): Last batch of test classes taking advantage of get/setBuilder now
14:00 gilleain joined #cdk
14:58 Gpox joined #cdk
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15:56 CIA-16 cdk: rajarshi * r13536 /cdk/branches/mark_rynbeek-vflib/src/ (4 files in 2 dirs): Updated code so that atom matches consider whether the query is a IQueryAtom or an ordinary IAtom. One unit test fails. Also added some exceptions for robustness
16:33 shk3 joined #cdk
16:38 CIA-16 cdk: rajarshi * r13537 /cdk/branches/mark_rynbeek-vflib/sr​c/test/org/openscience/cdk/isomorph​ism/SubgraphIsomorphismTest.java: fixed some typos
16:40 carsten joined #cdk
16:57 CIA-16 cdk: rajarshi * r13538 /cdk/branches/mark_rynbeek-vflib/src/main/o​rg/openscience/cdk/isomorphism/State.java: Updted so that bond aromaticity is also check in the equivalence test (since bond orders do not indicate aromaticity). fixes the failing test from the last commit
17:08 CIA-16 cdk: rajarshi * r13539 /cdk/branches/mark_rynbeek-vflib/src/main/org/open​science/cdk/isomorphism/SubgraphIsomorphism.java: Renamed args for constructor - esier to undersrtand
17:16 CIA-16 cdk: rajarshi * r13540 /cdk/branches/mark_rynbeek-vflib/sr​c/test/org/openscience/cdk/isomorph​ism/SubgraphIsomorphismTest.java: Added a trest for CCC in C1CC1. Fails
17:18 CIA-16 cdk: rajarshi * r13541 /cdk/branches/mark_rynbeek-vflib/sr​c/test/org/openscience/cdk/isomorph​ism/SubgraphIsomorphismTest.java: Stupid typos. Fixed test, passes fine
17:21 CIA-16 cdk: rajarshi * r13542 /cdk/branches/mark_rynbeek-vflib/sr​c/test/org/openscience/cdk/isomorph​ism/SubgraphIsomorphismTest.java: Added another test case
17:46 CIA-16 cdk: shk3 * r13543 /jchempaint/trunk/src/main/​org/openscience/jchempaint/ (14 files in 4 dirs): more functionality
18:45 timvdm joined #cdk
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20:59 CIA-16 blueobelisk: pansanel * r263 /structures/trunk/ (CMakeLists.txt src/index.xml xml/l10n.xml): Add Traditional Chinese translation
20:59 CIA-16 blueobelisk: pansanel * r264 /structures-html/trunk/index.html: Add Traditional Chinese translation
21:12 edrin joined #cdk

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