Camelia, the Perl 6 bug

IRC log for #cdk, 2009-03-08

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All times shown according to UTC.

Time Nick Message
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11:25 CIA-62 cdk: egonw * r14369 /cdk/branches/cdk-1.2.x/src/main/org/op​enscience/cdk/qsar/descriptors/molecula​r/LongestAliphaticChainDescriptor.java: Removed output to STDOUT (fixes #2672209)
11:36 CIA-62 cdk: egonw * r14370 /cdk/branches/cdk-1.2.x/src/main/o​rg/openscience/cdk/tools/manipulat​or/AtomContainerManipulator.java: Added more info on why this method will fail if no isotope info is set, and what to do instead (addresses #2671867)
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15:21 CIA-62 cdk: egonw * r14371 /cdk/branches/cdk-1.2.x/src/ (4 files in 2 dirs): Added two common templates: hexane and sterane
15:22 CIA-62 cdk: egonw * r14372 /cdk/branches/cdk-1.2.x/src/main/org/o​penscience/cdk/layout/RingPlacer.java: Layout of benzene on common top-down orientation, not flat on its side (fixes #2645366)
15:22 CIA-62 cdk: egonw * r14373 /cdk/branches/cdk-1.2.x/src/test/org/opensc​ience/cdk/layout/TemplateHandlerTest.java: Added unit tests to show that the template handlers are failing as soon as a bond order or an element is changed
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21:32 CIA-62 cdk: egonw * r14374 /cdk/branches/cdk-1.2.x/src/main/org/open​science/cdk/layout/TemplateHandler.java: Bit of code clean up: unneeded explicit import
21:33 CIA-62 cdk: egonw * r14375 /cdk/branches/cdk-1.2.x/src/ (4 files in 2 dirs):
21:33 CIA-62 cdk: Removed benzene: too common when we are not going to match element or bond order, and upright benzenes is fixed now
21:33 CIA-62 cdk: anyway. Replaced it with a larger ring system, which otherwise end up as a close to circle ring polygon.
21:44 CIA-62 cdk: egonw * r14376 /cdk/branches/cdk-1.2.x/src/ (2 files in 2 dirs): Fixed writing of IMolecule
22:12 egonw joined #cdk

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