Camelia, the Perl 6 bug

IRC log for #cdk, 2009-08-11

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All times shown according to UTC.

Time Nick Message
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08:27 CIA-72 cdk: mark_rynbeek * r14708 /jchempaint/trunk/src/main/​org/openscience/jchempaint/ (RenderPanel.java action/ZoomAction.java): Fixes for zoom behaviour. The shifting is now taken care of in RenderPanel, not Renderer
08:28 CIA-72 cdk: mark_rynbeek * r14709 /jchempaint/trunk/src/main/org/openscienc​e/jchempaint/application/JChemPaint.java:
08:28 CIA-72 cdk: Fixes to deal with SMILES. Previous version did not open SMILES files properly.
08:28 CIA-72 cdk: The fix properly calculates 2D coordinates (code nicked form BioClipse)
08:30 CIA-72 cdk: mark_rynbeek * r14710 /jchempaint/trunk/src/main/​org/openscience/jchempaint/ (action/OpenAction.java io/JCPFileFilter.java):
08:30 CIA-72 cdk: Fixes on opening file:
08:30 CIA-72 cdk: - set zoom to factor 1
08:30 CIA-72 cdk: - flip (this is a hack, molecules are drawn upside down)
08:30 CIA-72 cdk: - allow alternative file extensions (for example ".smiles" and ".smi" for SMILES
08:47 CIA-72 cdk: steinbeck * r14711 /cdk-taverna-paper/trunk/cd​k-taverna/bmc_article.tex: fixed a lot of language issues in the db validation section
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12:01 jonalv what was the name of that MySQL molecule dataqbase project again?
12:02 jonalv jpansanel?
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12:21 jonalv jpansanel: What's the difference between Mychem^2 and Mychem^3?
12:21 jonalv is it simply a version thing?
12:21 jonalv Do I want to lock at the higher number without doubt?
12:22 jonalv |look
13:13 bag jonalv: mychem2 is for openbabel2.1
13:13 bag mychem3 for openbabel2.2 afaik
13:13 jonalv bag: is there any reason to want to work with openbabel2.1?
13:13 bag i don't think so
13:14 jonalv bag: thanks
13:14 bag np
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20:33 CIA-72 cdk: thomaskuhn * r14712 /cdk-taverna-paper/trunk/cdk-taverna/ (6 files in 2 dirs): Done some work on the article
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