Camelia, the Perl 6 bug

IRC log for #cdk, 2010-02-12

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All times shown according to UTC.

Time Nick Message
06:12 sneumann joined #cdk
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09:37 CIA-50 cdk: shk3 * r15390 /jchempaint/branches/3_0/po/ (27 files in 2 dirs): updated translations
09:42 CIA-50 cdk: annulen * r15391 /jchempaint/trunk/src/main/org/openscience​/jchempaint/controller/ControllerHub.java: Function invertStereoInSelection
09:43 CIA-50 cdk: annulen * r15392 /jchempaint/trunk/src/main/org/openscience/​jchempaint/controller/Rotate3DModule.java: Improved compatibility with stereochemistry
09:54 CIA-50 cdk: annulen * r15393 /jchempaint/trunk/src/main/org/openscience/​jchempaint/controller/IChemModelRelay.java: Function invertStereoInSelection
09:57 CIA-50 cdk: annulen * r15394 /jchempaint/trunk/src/main/org/openscience/jchem​paint/resources/JChemPaintResources.properties: gif->png
10:39 jbrefort joined #cdk
10:40 Andreas joined #cdk
10:45 CIA-50 cdk: shk3 * r15395 /jchempaint/trunk/po/ (37 files in 2 dirs): updated language files and classes
10:59 CIA-50 cdk: shk3 * r15396 /jchempaint/trunk/libdevel/ant-contrib-0.6.jar: added ant-contrib to devellib
10:59 Andreas left #cdk
11:00 CIA-50 cdk: shk3 * r15397 /jchempaint/trunk/build.xml:
11:00 CIA-50 cdk: Added a task to generate pot and pos files; languages
11:00 CIA-50 cdk: are now picked up automatically
11:12 CIA-50 cdk: shk3 * r15398 /jchempaint/branches/3_0/libdevel/ (. ant-contrib-0.6.jar): added the ant-contrib jar
11:14 CIA-50 cdk: shk3 * r15399 /jchempaint/branches/3_0/build.xml:
11:14 CIA-50 cdk: Added a task to generate pot and pos files; languages
11:14 CIA-50 cdk: are now picked up automatically
11:20 CIA-50 org.openscience.cdk: Egon Willighagen master * r9a34f86 / (5 files in 3 dirs): Added first draft of CDK150 - http://bit.ly/aIJlEg
11:20 CIA-50 org.openscience.cdk: egonw master * rfcb1465 / cdk-externals/net.sf.jniinchi/META-INF/MANIFEST.MF :
11:20 CIA-50 org.openscience.cdk: Fixed Bundle-ClassPath
11:20 CIA-50 org.openscience.cdk: git-svn-id: https://bioclipse.svn.sourceforge.net/s​vnroot/bioclipse/bioclipse2/trunk@7407 fcb5ba71-d80d-0410-8237-ba3920747fcc - http://bit.ly/aGpuSP
11:20 CIA-50 org.openscience.cdk: egonw master * r1b7e77e / (5 files in 3 dirs):
11:20 CIA-50 org.openscience.cdk: Upgraded JNI-InChI to 0.5
11:20 CIA-50 org.openscience.cdk: git-svn-id: https://bioclipse.svn.sourceforge.net/s​vnroot/bioclipse/bioclipse2/trunk@7992 fcb5ba71-d80d-0410-8237-ba3920747fcc - http://bit.ly/bib74k
11:20 CIA-50 org.openscience.cdk: egonw master * r9fe69cc / cdk-externals/net.sf.jniinchi/META-INF/MANIFEST.MF :
11:20 CIA-50 org.openscience.cdk: Fixed version number for current jar
11:20 CIA-50 org.openscience.cdk: git-svn-id: https://bioclipse.svn.sourceforge.net/s​vnroot/bioclipse/bioclipse2/trunk@7995 fcb5ba71-d80d-0410-8237-ba3920747fcc - http://bit.ly/bm83jt
11:20 CIA-50 org.openscience.cdk: Egon Willighagen master * refeab1d / (10 files in 6 dirs): Moved net.sf.jniinchi from cdk-externals to externals - http://bit.ly/cKWUJ8
11:43 CIA-50 org.openscience.cdk: Egon Willighagen master * r6d4ab31 / (50 files in 30 dirs): Moved org.xmlpull.xpp3, org.rosuda.jri, org.omegahat.sjava, org.jama, org.3pq.jgrapht from cdk-externals to externals - http://bit.ly/d1a1lV
11:55 CIA-50 cdk: shk3 * r15400 /jchempaint/trunk/po/ (5 files in 2 dirs): updated german translation
12:01 CIA-50 org.openscience.cdk: Egon Willighagen master * r7a867da / (1214 files in 289 dirs): Uploaded bundles for CDK 1.3.2 - http://bit.ly/9VxMFz
12:02 CIA-50 cdk: shk3 * r15401 /jchempaint/branches/3_0/po/ca.po: prepared ca file for launchpad
12:09 CIA-50 cdk: shk3 * r15402 /jchempaint/trunk/src/main/org/openscience/jche​mpaint/resources/JCPGUI_application.properties: removed merge artefact
12:19 CIA-50 cdk: shk3 * r15403 /jchempaint/trunk/src/main/org/o​penscience/jchempaint/resources/ (JCPGUI_applet.properties JCPGUI_application.properties):
12:19 CIA-50 cdk: The merge had destroyed the reaction menu items,
12:19 CIA-50 cdk: re-added thes
12:52 CIA-50 org.openscience.cdk: Egon Willighagen cdk-jchempaint * r85688cc / (18 files in 12 dirs): Removed bundles which are not supposed to be used - http://bit.ly/dgZzkn
12:52 CIA-50 org.openscience.cdk: Egon Willighagen cdk-jchempaint * r1f87257 / .gitignore : Ignore autogenerated bin/ folders - http://bit.ly/dpQsBT
12:54 CIA-50 org.openscience.cdk: Egon Willighagen master * r8678639 / .gitignore : Ignore autogenerated bin/ folders - http://bit.ly/9g6E55
12:54 CIA-50 org.openscience.cdk: Egon Willighagen master * r316eb01 / (18 files in 12 dirs): Removed bundles which are not supposed to be used - http://bit.ly/9Vk6Wr
13:42 carsten joined #cdk
14:11 CIA-50 org.openscience.cdk: Egon Willighagen master * re4dd573 / (120 files in 64 dirs): Added missing data files - http://bit.ly/9cvhrG
14:17 CIA-50 org.openscience.cdk: Egon Willighagen cdk-jchempaint * rfc2ccae / (128 files in 72 dirs): Added missing data files - http://bit.ly/anNdxT
14:23 PeterOdeus left #cdk
14:58 CIA-50 cdk: shk3 * r15404 /detgen/trunk/ (3 files in 2 dirs):
14:58 CIA-50 cdk: speeded up the generator a bit by using NoNotify
14:58 CIA-50 cdk: objects
15:20 egonw Gpox: ping
15:20 Gpox egonw: pong
15:21 egonw I'm pondering about when to move Bioclipse 2.3 to the new CDK-JChemPaint ...
15:21 egonw given my cold, and that I already messed up in one email regarding license compatibility (those things keep be confusing), I am not going to do it today...
15:22 egonw but then again, given stability, we should not wait too long either...
15:22 egonw right now, I see that Bioclipse needs updating for:
15:22 egonw 1. the new periodic table code in 1.3.2
15:22 egonw the first bits of RenderingParameter<T> code...
15:22 egonw 2. the first bits of RenderingParameter<T> code...
15:22 egonw (now with numbering)
15:23 egonw like set/getAtomRadius()
15:25 Gpox The jcpglobal manager and the preference page should be rewriten to use the new parameters dynamicly
15:26 egonw I also see a few commits in cdk-externals/trunk... more than just the radical support
15:26 egonw yes, that makes 3
15:26 egonw and mine four...
15:26 egonw should we just go for it?
15:27 egonw and write down these four things as bug reports?
15:27 egonw as blockers for the 2.4 release
15:27 egonw (so that I do not forget about them)
15:55 egonw Gpox: what d'you think? move on, on hold on a bit longer?
15:57 Gpox moving on. Would be nice with OSGi jars but that will come in later once the build process in place
16:06 egonw what defines a OSGi jar?
16:08 Gpox jar with the osgi meta data, basicly what we have only it is in source
16:09 egonw ic
16:09 egonw URL with details?
16:09 Gpox I think a p2 repository would simplify the build process for bioclipse, not having to build the cdk each time the chemoinformatics feature is built
16:09 * egonw is updating bioclipse.cheminformatics to accomodate for the new cdk plugins
16:09 egonw Gpox: if only I knew what that meant :)
16:09 egonw but it sound like a good idea!
16:10 Gpox http://blog.springsource.com/20​08/02/18/creating-osgi-bundles/
16:10 zarah Gpox's link is also http://tinyurl.com/nwhszk
16:10 egonw ack
16:13 egonw Gpox: OK, I see a 5.
16:13 egonw 5. first release cdk-jchempaint-4 with the radical support
16:15 Gpox and the missing commits from cdk-external/trunk?
16:16 egonw that will have to come in -5
16:17 egonw @pz 1868
16:17 zarah http://pele.farmbio.uu.se/cgi-bi​n/bugzilla/show_bug.cgi?id=1868
16:17 egonw @pz jcp patches
16:18 zarah [1868] check JCP patches in the biocl... http://tinyurl.com/ydw8yzg
16:18 zarah Entire list at http://tinyurl.com/yh2qnkx
17:38 CIA-50 cdk: shk3 * r15405 /detgen/trunk/ (4 files in 2 dirs): Some performance improvements
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