Camelia, the Perl 6 bug

IRC log for #cdk, 2010-03-27

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All times shown according to UTC.

Time Nick Message
02:59 CIA-45 cdk: Egon Willighagen cdk-1.2.x * r19a976c / src/main/org/openscience/cdk/io/IChemObjectIO.java :
02:59 CIA-45 cdk: Improved JavaDoc:
02:59 CIA-45 cdk: * fixed outdated referrals to classes when this was still IChemObjectReader.
02:59 CIA-45 cdk: * now uses {@link} where appropriate
02:59 CIA-45 cdk: * added missing JavaDoc for @param and @return
02:59 CIA-45 cdk: Signed-off-by: Rajarshi Guha <rajarshi.guha@gmail.com> - http://bit.ly/bhcllV
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05:22 CIA-45 cdk: Egon Willighagen 73-rdf * r48fc775 / javadoc.xml : Added iordf to the ojdcheck target - http://bit.ly/a9KYob
05:43 CIA-45 cdk: Egon Willighagen f-73-rdf * r6ca8dde / (29 files in 12 dirs):
05:43 CIA-45 cdk: Defined a new file format, serializing the CDK data model into the Web Ontology Language (OWL) in the Notation3 (N3) format.
05:43 CIA-45 cdk: * added framework to convert the CDK data model into a Jena Model
05:43 CIA-45 cdk: * added reader and writer for the CDKOWL/N3 format
05:43 CIA-45 cdk: * added unit tests for roundtripping CDK data models
05:43 CIA-45 cdk: * sets up a iordf module, because of the Jena dependencies
05:43 CIA-45 cdk: * hooked into the PMD, unit, and JavaDoc testing - http://bit.ly/d1sMFz
05:48 CIA-45 cdk: Egon Willighagen f-73-rdf * r50f30f8 / (28 files in 11 dirs):
05:48 CIA-45 cdk: Defined a new file format, serializing the CDK data model into the Web Ontology Language (OWL) in the Notation3 (N3) format.
05:48 CIA-45 cdk: * added framework to convert the CDK data model into a Jena Model
05:48 CIA-45 cdk: * added reader and writer for the CDKOWL/N3 format
05:48 CIA-45 cdk: * added unit tests for roundtripping CDK data models
05:48 CIA-45 cdk: * sets up a iordf module, because of the Jena dependencies
05:48 CIA-45 cdk: * hooked into the PMD, unit, and JavaDoc testing - http://bit.ly/dzZEYH
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09:02 CIA-45 cdk: Egon Willighagen 122-chemObjectCloneNPE * rac16c5f / src/test/org/openscience/cdk/inter​faces/AbstractChemObjectTest.java : Added @cdk.bug annotation, and restricted testing to the bug - http://bit.ly/aj3OZG
09:14 CIA-45 cdk: Arvid Berg cdk-1.2.x * r0aa632a / src/test/org/openscience/cdk/inter​faces/AbstractChemObjectTest.java : Test checking for NPE when cloning with property with null as value - http://bit.ly/alxMfD
09:14 CIA-45 cdk: Egon Willighagen cdk-1.2.x * rce11b52 / src/test/org/openscience/cdk/inter​faces/AbstractChemObjectTest.java : Removed try/catch to retain the stacktrace of where the NPE occurs - http://bit.ly/b3Xls1
09:14 CIA-45 cdk: Egon Willighagen cdk-1.2.x * r3b08f1a / src/test/org/openscience/cdk/inter​faces/AbstractChemObjectTest.java : Added @cdk.bug annotation, and restricted testing to the bug - http://bit.ly/czYqtl
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10:41 s9asad joined #cdk
10:41 s9asad Hi everyone
10:41 egonw_ hi s9asad
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13:04 CIA-45 cdk: Egon Willighagen master * r1fc3430 / develjar/ojdcheck.jar :
13:04 CIA-45 cdk: Updated the OpenJavaDocCheck library to 0.3
13:04 CIA-45 cdk: Signed-off-by: Rajarshi Guha <rajarshi.guha@gmail.com> - http://bit.ly/cu44L6
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17:44 CIA-45 cdk: Stefan Kuhn cdk-1.2.x * rc26ae95 / src/test/org/openscience/cdk/​smiles/SmilesParserTest.java :
17:44 CIA-45 cdk: Added tests for two cases of aromatic rings
17:44 CIA-45 cdk: Signed-off-by: Rajarshi Guha <rajarshi.guha@gmail.com> - http://bit.ly/c1xcFZ
17:44 CIA-45 cdk: Egon Willighagen cdk-1.2.x * rf088cd6 / src/test/org/openscience/cdk/​smiles/SmilesParserTest.java :
17:44 CIA-45 cdk: Added InChI, and link to existing pyrolle test, using a different SMILES
17:44 CIA-45 cdk: Signed-off-by: Rajarshi Guha <rajarshi.guha@gmail.com> - http://bit.ly/bwV0U9
17:44 CIA-45 cdk: Egon Willighagen cdk-1.2.x * r6fcc3d0 / src/test/org/openscience/cdk/​smiles/SmilesParserTest.java :
17:44 CIA-45 cdk: Shortened the SMILES to only contain the aromatic atoms, allowing a foreach loop: replaced for-loop by a foreach-loop, solving also the not testing all atoms in the testAromaticty() test.
17:44 CIA-45 cdk: Signed-off-by: Rajarshi Guha <rajarshi.guha@gmail.com> - http://bit.ly/9TDczR
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